RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 IGHV3-49A0A0A0MS15 119 aa13.4□□□□□ -0.26
FN1-208ENST00000426059 IGHV3-66A0A0C4DH42 116 aa13.4□□□□□ -0.26
FN1-208ENST00000426059 LINC00479Q96M42 142 aa13.4□□□□□ -0.26
FN1-208ENST00000426059 FLNBO75369 2602 aaKnown RBP13.4□□□□□ -0.26
FN1-208ENST00000426059 ARL3P36405 182 aa13.4□□□□□ -0.26
FN1-208ENST00000426059 RPL23P62829 140 aaKnown RBP13.4□□□□□ -0.26
FN1-208ENST00000426059 GNG5P63218 68 aa13.4□□□□□ -0.26
FN1-208ENST00000426059 RHEBQ15382 184 aa13.4□□□□□ -0.26
FN1-208ENST00000426059 ESM1Q9NQ30 184 aa13.4□□□□□ -0.26
FN1-208ENST00000426059 RABAC1Q9UI14 185 aa13.4□□□□□ -0.26
FN1-208ENST00000426059 Q71RC1 249 aaPredicted RBP13.39□□□□□ -0.27
FN1-208ENST00000426059 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
FN1-208ENST00000426059 OR4X2Q8NGF9 303 aa13.39□□□□□ -0.27
FN1-208ENST00000426059 RPH3ALQ9UNE2 315 aa13.39□□□□□ -0.27
FN1-208ENST00000426059 ARL2-SNX15V9GYD0 113 aa13.39□□□□□ -0.27
FN1-208ENST00000426059 PGPA6NDG6 321 aa13.39□□□□□ -0.27
FN1-208ENST00000426059 DNAJC9-AS1A6NH13 148 aa13.39□□□□□ -0.27
FN1-208ENST00000426059 H3BUA1 57 aa13.39□□□□□ -0.27
FN1-208ENST00000426059 PSMB8P28062 276 aa13.39□□□□□ -0.27
FN1-208ENST00000426059 GAR1Q9NY12 217 aaKnown RBP13.39□□□□□ -0.27
FN1-208ENST00000426059 CLPSL1A2RUU4 121 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 FAM181BA6NEQ2 426 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 BMPR1BO00238 502 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 IGHG4P01861 327 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 APOHP02749 345 aaPredicted RBP13.38□□□□□ -0.27
FN1-208ENST00000426059 S100A12P80511 92 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 EXOC3-AS1Q8N2X6 119 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 HIVEP2P31629 2446 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 MRPS12O15235 138 aaKnown RBP13.38□□□□□ -0.27
FN1-208ENST00000426059 TEX29Q8N6K0 151 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 C11orf52Q96A22 123 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 SGK494Q96LW2 274 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 BIN3Q9NQY0 253 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 TMEM14CQ9P0S9 112 aa13.38□□□□□ -0.27
FN1-208ENST00000426059 SLC17A3O00476 420 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 RPLP1P05386 114 aaKnown RBP13.37□□□□□ -0.27
FN1-208ENST00000426059 HIST1H1EP10412 219 aaKnown RBP13.37□□□□□ -0.27
FN1-208ENST00000426059 Q9H3A6 140 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 TRAV34A0A0B4J273 112 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 NDUFS6O75380 124 aaKnown RBP13.37□□□□□ -0.27
FN1-208ENST00000426059 BRI3O95415 125 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 IGLC2P0DOY2 106 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 MYCNOSP40205 109 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 PNRC1Q12796 327 aaPredicted RBP13.37□□□□□ -0.27
FN1-208ENST00000426059 RNF212Q495C1 297 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 HIST2H2BDQ6DRA6 164 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 UNQ9165/PRO28630Q6UXU0 137 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 C2CD4CQ8TF44 421 aa13.37□□□□□ -0.27
FN1-208ENST00000426059 ZMAT5Q9UDW3 170 aaKnown RBP13.37□□□□□ -0.27
FN1-208ENST00000426059 SLC25A5P05141 298 aaKnown RBP13.36□□□□□ -0.27
FN1-208ENST00000426059 LINC01551Q86U37 167 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 OR8I2Q8N0Y5 310 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 SMCO4Q9NRQ5 59 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.36□□□□□ -0.27
FN1-208ENST00000426059 HELTA6NFD8 242 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 LY6G6DO95868 133 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 RELQ04864 619 aaPredicted RBP13.36□□□□□ -0.27
FN1-208ENST00000426059 OCC1Q8TAD7 63 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 URGCP-MRPS24S4R325 110 aa13.36□□□□□ -0.27
FN1-208ENST00000426059 TRBV19A0A075B6N1 114 aa13.35□□□□□ -0.27
FN1-208ENST00000426059 A0A0G2JLM5 398 aa13.35□□□□□ -0.27
FN1-208ENST00000426059 MEOX2P50222 304 aa13.35□□□□□ -0.27
FN1-208ENST00000426059 SERTAD4Q9NUC0 356 aa13.35□□□□□ -0.27
FN1-208ENST00000426059 SMAD5-AS1Q9Y6J3 95 aa13.35□□□□□ -0.27
FN1-208ENST00000426059 TEX38Q6PEX7 206 aa13.34□□□□□ -0.27
FN1-208ENST00000426059 NHLRC2Q8NBF2 726 aa13.34□□□□□ -0.27
FN1-208ENST00000426059 SETD2Q9BYW2 2564 aaPredicted RBP13.34□□□□□ -0.27
FN1-208ENST00000426059 PEX7O00628 323 aa13.34□□□□□ -0.27
FN1-208ENST00000426059 BUB3O43684 328 aa13.34□□□□□ -0.27
FN1-208ENST00000426059 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
FN1-208ENST00000426059 FAM24BQ8N5W8 94 aa13.34□□□□□ -0.27
FN1-208ENST00000426059 EPDR1Q9UM22 224 aa13.34□□□□□ -0.27
FN1-208ENST00000426059 SELENOKQ9Y6D0 94 aa13.34□□□□□ -0.27
FN1-208ENST00000426059 HIVEP1P15822 2718 aa13.33□□□□□ -0.28
FN1-208ENST00000426059 ZNF320A2RRD8 509 aa13.33□□□□□ -0.28
FN1-208ENST00000426059 K7EN84 100 aa13.33□□□□□ -0.28
FN1-208ENST00000426059 IGFL4Q6B9Z1 124 aa13.33□□□□□ -0.28
FN1-208ENST00000426059 S100A7AQ86SG5 101 aa13.33□□□□□ -0.28
FN1-208ENST00000426059 B4DEV8 164 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 SLC35B1P78383 322 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 OR5I1Q13606 314 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 A0A087WWC5 75 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 COLCA2A8K830 154 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 ISLRO14498 428 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 GNG4P50150 75 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 Q6ZSV7 163 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 Q8N2B8 174 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 TMEM86BQ8N661 226 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 METTL26Q96S19 204 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 ATP6V0BQ99437 205 aa13.32□□□□□ -0.28
FN1-208ENST00000426059 M0R3E3 92 aa13.31□□□□□ -0.28
FN1-208ENST00000426059 RPL7P18124 248 aaKnown RBP13.31□□□□□ -0.28
FN1-208ENST00000426059 SIGLEC15Q6ZMC9 328 aa13.31□□□□□ -0.28
FN1-208ENST00000426059 PEF1Q9UBV8 284 aaKnown RBP13.31□□□□□ -0.28
FN1-208ENST00000426059 CRYBA1P05813 215 aa13.31□□□□□ -0.28
FN1-208ENST00000426059 SRD5A1P18405 259 aa13.31□□□□□ -0.28
FN1-208ENST00000426059 TRAV8-1A0A0A6YYK1 113 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms