RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LYZL2Q7Z4W2 148 aa8.64□□□□□ -1.03
HLA-DQB3-203ENST00000425319 OR11H7Q8NGC8 314 aa8.64□□□□□ -1.03
HLA-DQB3-203ENST00000425319 ZNRF2Q8NHG8 242 aa8.64□□□□□ -1.03
HLA-DQB3-203ENST00000425319 GNPNAT1Q96EK6 184 aaPredicted RBP8.64□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SCRT2Q9NQ03 307 aa8.64□□□□□ -1.03
HLA-DQB3-203ENST00000425319 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 BOLA2-SMG1P6H3BVE0 249 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 M0R2Z0 102 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 CTDSPLO15194 276 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 IL5P05113 134 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 ANXA7P20073 488 aaKnown RBP8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 FAAP20Q6NZ36 180 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SSX7Q7RTT5 188 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 Q8N1X5 172 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 THAP8Q8NA92 274 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SMIM4Q8WVI0 70 aa8.63□□□□□ -1.03
HLA-DQB3-203ENST00000425319 IGKV1D-37A0A075B6S9 117 aa8.62□□□□□ -1.03
HLA-DQB3-203ENST00000425319 IAPPP10997 89 aa8.62□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SLC25A6P12236 298 aa8.62□□□□□ -1.03
HLA-DQB3-203ENST00000425319 HIST1H1AQ02539 215 aaPredicted RBP8.62□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SLC25A32Q9H2D1 315 aa8.62□□□□□ -1.03
HLA-DQB3-203ENST00000425319 STRAPQ9Y3F4 350 aaKnown RBP8.62□□□□□ -1.03
HLA-DQB3-203ENST00000425319 DNAH6Q9C0G6 4158 aa8.62□□□□□ -1.03
HLA-DQB3-203ENST00000425319 VPS13DQ5THJ4 4388 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 A0A1W2PPQ1 181 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SMCO3A2RU48 225 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 A8MTW9 85 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SNURFLB1AK76 121 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 WRBO00258 174 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 HYPMO75409 117 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 OR5G3P0C626 314 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 CDKN1BP46527 198 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 AP3S2P59780 193 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SELENOTP62341 195 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 TMEM128Q5BJH2 165 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SPANXN5Q5MJ07 72 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 AMTNQ6UX39 209 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 ZNF503Q96F45 646 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 C20orf144Q9BQM9 153 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 HIGD1AQ9Y241 93 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
HLA-DQB3-203ENST00000425319 ANKRD20A5PA0PJZ0 165 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 H7BYZ3 331 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SYNGR2O43760 224 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 RLN2P04090 185 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 M6PRP20645 277 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 VAMP1P23763 118 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 FCN2Q15485 313 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 TMED4Q7Z7H5 227 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 OR8A1Q8NGG7 326 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 C20orf173Q96LM9 149 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 SLC25A39Q9BZJ4 359 aaPredicted RBP8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 NOP10Q9NPE3 64 aaKnown RBP8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
HLA-DQB3-203ENST00000425319 HECTD4Q9Y4D8 3996 aa8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 TRAV12-2A0A075B6T6 113 aa8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 CTDSP2O14595 271 aa8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 PSG3Q16557 428 aa8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 BAP18Q8IXM2 172 aa8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 RXFP4Q8TDU9 374 aa8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 TMEM263Q8WUH6 116 aaKnown RBP8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 RNF141Q8WVD5 230 aa8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 PRR13Q9NZ81 148 aa8.59□□□□□ -1.03
HLA-DQB3-203ENST00000425319 MUC4Q99102 2169 aa8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 FABP12A6NFH5 140 aa8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 H3BNG1 76 aa8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 NOL3O60936 208 aaKnown RBP8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 AZU1P20160 251 aa8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 CTF1Q16619 201 aa8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 RNF182Q8N6D2 247 aa8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 SLC25A21Q9BQT8 299 aaPredicted RBP8.58□□□□□ -1.04
HLA-DQB3-203ENST00000425319 TRAV26-1A0A087WT03 109 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PITX3O75364 302 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 IFNA5P01569 189 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PXDC1Q5TGL8 231 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 IGFL4Q6B9Z1 124 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 CCDC190Q86UF4 302 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 TOMM5Q8N4H5 51 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 ZBTB8BQ8NAP8 495 aaPredicted RBP8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 RPUSD4Q96CM3 377 aaKnown RBP8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 SLC50A1Q9BRV3 221 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 SHANK2-AS3Q9BTD1 123 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 MIXL1Q9H2W2 232 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 Q9H3A6 140 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 NPVFQ9HCQ7 196 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 MGAT4CQ9UBM8 478 aa8.57□□□□□ -1.04
HLA-DQB3-203ENST00000425319 IGKV1OR2-108A0A075B7D4 117 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 TRAV9-2A0A087WT02 112 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 H3BRN7 92 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 GOSR2O14653 212 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 PRM2P04554 102 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 LINC00869P0C866 280 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 CXCL2P19875 107 aa8.56□□□□□ -1.04
HLA-DQB3-203ENST00000425319 CXCL3P19876 107 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms