RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TAS2R60P59551 318 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 OR5B12Q96R08 314 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 TRBV19A0A075B6N1 114 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 TPPP2P59282 170 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 C5orf17Q8NAS9 161 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 C17orf77Q96MU5 243 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 ATP6V0BQ99437 205 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 OTORQ9NRC9 128 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 RNF24Q9Y225 148 aa20.54■□□□□ 0.88
LDB1-202ENST00000425280 IGHV3OR16-8A0A075B7F1 116 aa20.53■□□□□ 0.88
LDB1-202ENST00000425280 C1orf196B1AJZ1 125 aa20.53■□□□□ 0.88
LDB1-202ENST00000425280 BMPR1BO00238 502 aa20.53■□□□□ 0.88
LDB1-202ENST00000425280 PPP1R2P9O14990 202 aa20.53■□□□□ 0.88
LDB1-202ENST00000425280 IGLV2-8P01709 118 aa20.53■□□□□ 0.88
LDB1-202ENST00000425280 FLI1Q01543 452 aaPredicted RBP20.53■□□□□ 0.88
LDB1-202ENST00000425280 ZFP82Q8N141 532 aa20.53■□□□□ 0.88
LDB1-202ENST00000425280 VPREB3Q9UKI3 123 aa20.52■□□□□ 0.88
LDB1-202ENST00000425280 TRBV24-1A0A075B6N3 115 aa20.52■□□□□ 0.87
LDB1-202ENST00000425280 TRAV34A0A0B4J273 112 aa20.52■□□□□ 0.87
LDB1-202ENST00000425280 RPS10P46783 165 aaKnown RBP20.52■□□□□ 0.87
LDB1-202ENST00000425280 OR5I1Q13606 314 aa20.52■□□□□ 0.87
LDB1-202ENST00000425280 FAM210BQ96KR6 192 aa20.52■□□□□ 0.87
LDB1-202ENST00000425280 SMAD7O15105 426 aaKnown RBP20.51■□□□□ 0.87
LDB1-202ENST00000425280 S100PP25815 95 aa20.51■□□□□ 0.87
LDB1-202ENST00000425280 CFHR3Q02985 330 aa20.51■□□□□ 0.87
LDB1-202ENST00000425280 EXOC3-AS1Q8N2X6 119 aa20.51■□□□□ 0.87
LDB1-202ENST00000425280 OR10G8Q8NGN5 311 aa20.51■□□□□ 0.87
LDB1-202ENST00000425280 ZNF580Q9UK33 172 aa20.51■□□□□ 0.87
LDB1-202ENST00000425280 ISLRO14498 428 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 ATG101Q9BSB4 218 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 KLK15Q9H2R5 256 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 RPH3ALQ9UNE2 315 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 PPP5D1E7EU14 171 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 IGLV1-40P01703 118 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 SRP14P37108 136 aaKnown RBP20.5■□□□□ 0.87
LDB1-202ENST00000425280 RAB5BP61020 215 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 TMEM95Q3KNT9 176 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 PRDM13Q9H4Q3 707 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 PDZD2O15018 2839 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 TEX15Q9BXT5 2789 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 ITPR3Q14573 2671 aa20.5■□□□□ 0.87
LDB1-202ENST00000425280 TMEM183BQ1AE95 376 aa20.49■□□□□ 0.87
LDB1-202ENST00000425280 USMG5Q96IX5 58 aa20.49■□□□□ 0.87
LDB1-202ENST00000425280 PYGO2Q9BRQ0 406 aa20.49■□□□□ 0.87
LDB1-202ENST00000425280 KLF12Q9Y4X4 402 aa20.49■□□□□ 0.87
LDB1-202ENST00000425280 GCGP01275 180 aa20.49■□□□□ 0.87
LDB1-202ENST00000425280 TCRAP04437 139 aa20.49■□□□□ 0.87
LDB1-202ENST00000425280 PF4V1P10720 104 aa20.49■□□□□ 0.87
LDB1-202ENST00000425280 RPL15P61313 204 aaKnown RBP20.49■□□□□ 0.87
LDB1-202ENST00000425280 C1QL4Q86Z23 238 aa20.49■□□□□ 0.87
LDB1-202ENST00000425280 CLPSL1A2RUU4 121 aa20.48■□□□□ 0.87
LDB1-202ENST00000425280 SLC17A3O00476 420 aa20.48■□□□□ 0.87
LDB1-202ENST00000425280 RELQ04864 619 aaPredicted RBP20.48■□□□□ 0.87
LDB1-202ENST00000425280 SIGLEC15Q6ZMC9 328 aa20.48■□□□□ 0.87
LDB1-202ENST00000425280 ZNF469Q96JG9 3925 aaPredicted RBP20.48■□□□□ 0.87
LDB1-202ENST00000425280 HOXA3O43365 443 aaPredicted RBP20.47■□□□□ 0.87
LDB1-202ENST00000425280 RPL7P18124 248 aaKnown RBP20.47■□□□□ 0.87
LDB1-202ENST00000425280 S100A7P31151 101 aa20.47■□□□□ 0.87
LDB1-202ENST00000425280 BAGE2Q86Y30 109 aa20.47■□□□□ 0.87
LDB1-202ENST00000425280 LYPD1Q8N2G4 141 aa20.47■□□□□ 0.87
LDB1-202ENST00000425280 NHLRC2Q8NBF2 726 aa20.47■□□□□ 0.87
LDB1-202ENST00000425280 FOXC2Q99958 501 aa20.47■□□□□ 0.87
LDB1-202ENST00000425280 ERVFC1-1P60608 527 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 UBE2G1P62253 170 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 OR8I2Q8N0Y5 310 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 IMMP2LQ96T52 175 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 GGCTO75223 188 aaKnown RBP20.46■□□□□ 0.87
LDB1-202ENST00000425280 MGST1P10620 155 aaKnown RBP20.46■□□□□ 0.87
LDB1-202ENST00000425280 ARL3P36405 182 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 PDE6HQ13956 83 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 KCNIP4Q6PIL6 250 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 LCNL1Q6ZST4 164 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 SGK494Q96LW2 274 aa20.46■□□□□ 0.87
LDB1-202ENST00000425280 A0A1W2PPQ1 181 aa20.45■□□□□ 0.86
LDB1-202ENST00000425280 FAM3BP58499 235 aaPredicted RBP20.45■□□□□ 0.86
LDB1-202ENST00000425280 CMTM2Q8TAZ6 248 aa20.45■□□□□ 0.86
LDB1-202ENST00000425280 TRBV12-3P01733 135 aa20.44■□□□□ 0.86
LDB1-202ENST00000425280 TMEM190Q8WZ59 177 aa20.44■□□□□ 0.86
LDB1-202ENST00000425280 SMAD5-AS1Q9Y6J3 95 aa20.44■□□□□ 0.86
LDB1-202ENST00000425280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.44■□□□□ 0.86
LDB1-202ENST00000425280 IGHV3-11P01762 117 aa20.44■□□□□ 0.86
LDB1-202ENST00000425280 RAB9AP51151 201 aa20.44■□□□□ 0.86
LDB1-202ENST00000425280 IL17RELQ6ZVW7 336 aa20.44■□□□□ 0.86
LDB1-202ENST00000425280 FMC1Q96HJ9 113 aa20.44■□□□□ 0.86
LDB1-202ENST00000425280 RNASE7Q9H1E1 156 aaKnown RBP20.44■□□□□ 0.86
LDB1-202ENST00000425280 BUB3O43684 328 aa20.43■□□□□ 0.86
LDB1-202ENST00000425280 S100A9P06702 114 aaKnown RBP20.43■□□□□ 0.86
LDB1-202ENST00000425280 OSTCQ9NRP0 149 aa20.43■□□□□ 0.86
LDB1-202ENST00000425280 V9GYV3 84 aa20.43■□□□□ 0.86
LDB1-202ENST00000425280 CCDC168Q8NDH2 2452 aa20.43■□□□□ 0.86
LDB1-202ENST00000425280 FOXL1Q12952 345 aa20.42■□□□□ 0.86
LDB1-202ENST00000425280 A0A0G2JLM5 398 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 IGHG4P01861 327 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 GOLT1AQ6ZVE7 132 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 METTL26Q96S19 204 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 PRSS22Q9GZN4 317 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 IL36BQ9NZH7 164 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 MXRA5Q9NR99 2828 aa20.41■□□□□ 0.86
LDB1-202ENST00000425280 GCN1Q92616 2671 aaKnown RBP20.41■□□□□ 0.86
LDB1-202ENST00000425280 ZNF207O43670 478 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms