RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 VN1R17PQ8TDU5 208 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 NEU4Q8WWR8 484 aaPredicted RBP8.5□□□□□ -1.05
CUX1-205ENST00000425244 WFDC12Q8WWY7 111 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 CCL19Q99731 98 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 IGLV1-47P01700 117 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 APCSP02743 223 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 COX6B1P14854 86 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 TFPI2P48307 235 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 LYZP61626 148 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 TDRG1Q3Y452 100 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 PPP1R27Q86WC6 154 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 RCHY1Q96PM5 261 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 IZUMO1RA6ND01 250 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 BMPR1BO00238 502 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 CNIH1O95406 144 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 NBEAP1P0C6P0 100 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 AMTP48728 403 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 Q0VG73 95 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 APCP25054 2843 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 CORTO00230 105 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 HLA-DQA1P01909 254 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 CRYGCP07315 174 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 CAMPP49913 170 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 ZNF841Q6ZN19 808 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 TRGV9Q99603 122 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 PAM16Q9Y3D7 125 aa8.49□□□□□ -1.05
CUX1-205ENST00000425244 LOC105371242A0A075B767 164 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 A0A1W2PRD5 423 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 A0A1W2PRF3 423 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 A0A1W2PRM7 423 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 RBP4P02753 201 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 PRB4P10163 310 aaPredicted RBP8.48□□□□□ -1.05
CUX1-205ENST00000425244 CD24P25063 80 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 GPR6P46095 362 aaPredicted RBP8.48□□□□□ -1.05
CUX1-205ENST00000425244 SLAQ13239 276 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 BATFQ16520 125 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 HIST2H2BCQ6DN03 193 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 STXBP6Q8NFX7 210 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 SRSF12Q8WXF0 261 aaKnown RBP8.48□□□□□ -1.05
CUX1-205ENST00000425244 TBL2Q9Y4P3 447 aaKnown RBP8.48□□□□□ -1.05
CUX1-205ENST00000425244 FASNP49327 2511 aaKnown RBP8.48□□□□□ -1.05
CUX1-205ENST00000425244 ZANQ9Y493 2812 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 CRYGBP07316 175 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 ESDP10768 282 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 TMEM116Q8NCL8 245 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 NUP35Q8NFH5 326 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 ORAOV1Q8WV07 137 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
CUX1-205ENST00000425244 ZNF586Q9NXT0 402 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 FBXL7Q9UJT9 491 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 RNF114Q9Y508 228 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 HILPDAQ9Y5L2 63 aa8.48□□□□□ -1.05
CUX1-205ENST00000425244 F11RQ9Y624 299 aaKnown RBP8.48□□□□□ -1.05
CUX1-205ENST00000425244 HIGD1CA8MV81 97 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 TEX22C9J3V5 150 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 NTF3P20783 257 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 EFNA4P52798 201 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 ARF6P62330 175 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 MMDQ15546 238 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 TMEM183BQ1AE95 376 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 COX19Q49B96 90 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 Q5PR19 223 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 TPTE2P1Q5T6R2 138 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 FAM19A2Q8N3H0 131 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 OR8B3Q8NGG8 313 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 GRAMD2BQ96HH9 432 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 OR8B2Q96RD0 313 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 BPESC1Q9GZL8 116 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 TIMM23O14925 209 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 GPX1P07203 203 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 PSG1P11464 419 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 ODF1Q14990 250 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 KCNS1Q96KK3 526 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 HIGD1AQ9Y241 93 aa8.47□□□□□ -1.05
CUX1-205ENST00000425244 A0A1W2PS18 150 aa8.46□□□□□ -1.05
CUX1-205ENST00000425244 IGHV4-39P01824 125 aa8.46□□□□□ -1.05
CUX1-205ENST00000425244 HIST1H1EP10412 219 aaKnown RBP8.46□□□□□ -1.05
CUX1-205ENST00000425244 PLA2G2AP14555 144 aa8.46□□□□□ -1.05
CUX1-205ENST00000425244 MYCNOSP40205 109 aa8.46□□□□□ -1.05
CUX1-205ENST00000425244 TCF24Q7RTU0 167 aa8.46□□□□□ -1.05
CUX1-205ENST00000425244 Q9H3A6 140 aa8.46□□□□□ -1.05
CUX1-205ENST00000425244 NRN1Q9NPD7 142 aa8.46□□□□□ -1.05
CUX1-205ENST00000425244 NAV2Q8IVL1 2488 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 J3QKU1 62 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 GP9P14770 177 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 ATP5J2P56134 94 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 UBE2V1Q13404 147 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 OR10J3Q5JRS4 329 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 GDF5OSQ5U4N7 250 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 FAM231DQ6ZW35 169 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 C8orf46Q8TAG6 207 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 MBD6Q96DN6 1003 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 RASL11BQ9BPW5 248 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 MIEN1Q9BRT3 115 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 WNT10AQ9GZT5 417 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 S4R3C0 116 aa8.46□□□□□ -1.06
CUX1-205ENST00000425244 TRAV8-1A0A0A6YYK1 113 aa8.45□□□□□ -1.06
CUX1-205ENST00000425244 M0QZ24 198 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms