RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 ZC2HC1AQ96GY0 325 aa11.26□□□□□ -0.61
TPM3P9-201ENST00000424846 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 UBE2V1Q13404 147 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 SLC25A39Q9BZJ4 359 aaPredicted RBP11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 TMEM133Q9H2Q1 129 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 ZNF492Q9P255 531 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 NPIPB6E9PJ23 425 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 KLK10O43240 276 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 RBP4P02753 201 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 CHEK1O14757 476 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 FAM106CPP0CH98 169 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 COX7A1P24310 79 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 MC5RP33032 325 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 FAM71F2Q6NXP2 309 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 TEX45Q8NA69 505 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 ZNF738Q8NE65 137 aa11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
TPM3P9-201ENST00000424846 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 NUDT3O95989 172 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 IGKV1-17P01599 117 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 LGALS7P47929 136 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 PCP4P48539 62 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 CT83Q5H943 113 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 ETFRF1Q6IPR1 90 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 SNAI2O43623 268 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 NCR2O95944 276 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 FBLN7Q53RD9 439 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 PPP1R27Q86WC6 154 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 SRSF12Q8WXF0 261 aaKnown RBP11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 TLN1Q9Y490 2541 aaKnown RBP11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 MED13LQ71F56 2210 aa11.24□□□□□ -0.61
TPM3P9-201ENST00000424846 ZFHX3Q15911 3703 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 IGHV1-3A0A0C4DH29 117 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 E7EQL1 145 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 M0R3E3 92 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 CRIP1P50238 77 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 RBX1P62877 108 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 SMIM12Q96EX1 92 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 NBASA2RRP1 2371 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 IGLV1-47P01700 117 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 PLP1P60201 277 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 KLF17Q5JT82 389 aaPredicted RBP11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 C8orf31Q8N9H6 132 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 NEU4Q8WWR8 484 aaPredicted RBP11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 C22orf15Q8WYQ4 148 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 CHCHD1Q96BP2 118 aaKnown RBP11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 CBY1Q9Y3M2 126 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 INSIG2Q9Y5U4 225 aa11.23□□□□□ -0.61
TPM3P9-201ENST00000424846 I3L2K1 104 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 LOXL1Q08397 574 aaPredicted RBP11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 A0A087X0K7 114 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 NDFIP1Q9BT67 221 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 DYNLRB1Q9NP97 96 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 OTORQ9NRC9 128 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 CEP295Q9C0D2 2601 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 CACNA1BQ00975 2339 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 OR2T8A6NH00 312 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 TAX1BP3O14907 124 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 HTR1DP28221 377 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 TCTAP57738 103 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 FXYD7P58549 80 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 GFRA4Q9GZZ7 299 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
TPM3P9-201ENST00000424846 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.61
TPM3P9-201ENST00000424846 SHISA9B4DS77 424 aa11.21□□□□□ -0.61
TPM3P9-201ENST00000424846 HAX1O00165 279 aa11.21□□□□□ -0.61
TPM3P9-201ENST00000424846 HOXB4P17483 251 aaPredicted RBP11.21□□□□□ -0.61
TPM3P9-201ENST00000424846 BVES-AS1Q5T3Y7 98 aa11.21□□□□□ -0.61
TPM3P9-201ENST00000424846 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
TPM3P9-201ENST00000424846 IGHV2-70DA0A0C4DH43 119 aa11.21□□□□□ -0.62
TPM3P9-201ENST00000424846 C8orf49Q96NF6 230 aa11.21□□□□□ -0.62
TPM3P9-201ENST00000424846 SCRT2Q9NQ03 307 aa11.21□□□□□ -0.62
TPM3P9-201ENST00000424846 WNK2Q9Y3S1 2297 aa11.21□□□□□ -0.62
TPM3P9-201ENST00000424846 BUB1B-PAK6H3BSN5 160 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 VAMP3Q15836 100 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 PRR30Q53SZ7 412 aaPredicted RBP11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 RASL11BQ9BPW5 248 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 C1RLQ9NZP8 487 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 SOX21Q9Y651 276 aaPredicted RBP11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 HRNRQ86YZ3 2850 aaPredicted RBP11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 TMSB15BA0A087X1C1 80 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 CBY3A6NI87 242 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 K7EIM0 57 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 SLC25A34Q6PIV7 304 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 KAAG1Q9UBP8 84 aa11.2□□□□□ -0.62
TPM3P9-201ENST00000424846 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
TPM3P9-201ENST00000424846 LIPFP07098 398 aa11.19□□□□□ -0.62
TPM3P9-201ENST00000424846 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
TPM3P9-201ENST00000424846 NGBQ9NPG2 151 aa11.19□□□□□ -0.62
TPM3P9-201ENST00000424846 A0A1B0GUT8 65 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms