RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 IGLV1-40P01703 118 aa16.25■□□□□ 0.19
GPC1-202ENST00000420138 HNF1AP20823 631 aa16.25■□□□□ 0.19
GPC1-202ENST00000420138 FABP9Q0Z7S8 132 aa16.25■□□□□ 0.19
GPC1-202ENST00000420138 SMR3AQ99954 134 aa16.25■□□□□ 0.19
GPC1-202ENST00000420138 TRGV3P03979 118 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 TRGC2P03986 189 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 SNRPCP09234 159 aaKnown RBP16.24■□□□□ 0.19
GPC1-202ENST00000420138 ATP5G2Q06055 141 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 CLEC19AQ6UXS0 136 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 KLK15Q9H2R5 256 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 AURKAIP1Q9NWT8 199 aaPredicted RBP16.24■□□□□ 0.19
GPC1-202ENST00000420138 BAHCC1Q9P281 2608 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 C9JCJ5 164 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 TMEM14CQ9P0S9 112 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 LY96Q9Y6Y9 160 aa16.24■□□□□ 0.19
GPC1-202ENST00000420138 PGPEP1LA6NFU8 196 aa16.23■□□□□ 0.19
GPC1-202ENST00000420138 MYCNOSP40205 109 aa16.23■□□□□ 0.19
GPC1-202ENST00000420138 SUMO1P63165 101 aaKnown RBP16.23■□□□□ 0.19
GPC1-202ENST00000420138 SIGLECL1Q8N7X8 197 aa16.23■□□□□ 0.19
GPC1-202ENST00000420138 OCC1Q8TAD7 63 aa16.23■□□□□ 0.19
GPC1-202ENST00000420138 ATP6V0BQ99437 205 aa16.23■□□□□ 0.19
GPC1-202ENST00000420138 ELOVL1Q9BW60 279 aa16.23■□□□□ 0.19
GPC1-202ENST00000420138 TPPP2P59282 170 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 KCNIP4Q6PIL6 250 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 ZNF600Q6ZNG1 722 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 SFRP2Q96HF1 295 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 SRD5A3Q9H8P0 318 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 ZFAND3Q9H8U3 227 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 GAR1Q9NY12 217 aaKnown RBP16.22■□□□□ 0.19
GPC1-202ENST00000420138 IGHV3-35A0A0C4DH35 117 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 MRPS12O15235 138 aaKnown RBP16.22■□□□□ 0.19
GPC1-202ENST00000420138 SCGB2A1O75556 95 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 NBEAP1P0C6P0 100 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 IMMP2LQ96T52 175 aa16.22■□□□□ 0.19
GPC1-202ENST00000420138 ZNF98A6NK75 572 aa16.21■□□□□ 0.19
GPC1-202ENST00000420138 GGCTO75223 188 aaKnown RBP16.21■□□□□ 0.19
GPC1-202ENST00000420138 LY6G6DO95868 133 aa16.21■□□□□ 0.19
GPC1-202ENST00000420138 CRYBB3P26998 211 aa16.21■□□□□ 0.19
GPC1-202ENST00000420138 TOMM20LQ6UXN7 152 aa16.21■□□□□ 0.19
GPC1-202ENST00000420138 ZNF702PQ9H963 129 aa16.21■□□□□ 0.19
GPC1-202ENST00000420138 HELTA6NFD8 242 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BKO60814 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BJP06899 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BOP23527 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BBP33778 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BDP58876 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BCP62807 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST2H2BEQ16778 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BHQ93079 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BNQ99877 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H2BMQ99879 126 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 ZNF586Q9NXT0 402 aa16.2■□□□□ 0.18
GPC1-202ENST00000420138 FLNBO75369 2602 aaKnown RBP16.2■□□□□ 0.18
GPC1-202ENST00000420138 SONP18583 2426 aaKnown RBP16.2■□□□□ 0.18
GPC1-202ENST00000420138 LCNL1Q6ZST4 164 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 ZNF329Q86UD4 541 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 USMG5Q96IX5 58 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 TMEM160Q9NX00 188 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 A0A1W2PPQ1 181 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 PPP5D1E7EU14 171 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 PF4V1P10720 104 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 NDUFA6P56556 154 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 OR10G8Q8NGN5 311 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 BLNKQ8WV28 456 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 FRZBQ92765 325 aa16.19■□□□□ 0.18
GPC1-202ENST00000420138 ANK3Q12955 4377 aaKnown RBP16.18■□□□□ 0.18
GPC1-202ENST00000420138 IGHV3OR16-8A0A075B7F1 116 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 H3BTX0 84 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 PHOX2AO14813 284 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 IGHG4P01861 327 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 S100A8P05109 93 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 IGLC2P0DOY2 106 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 HIST1H1EP10412 219 aaKnown RBP16.18■□□□□ 0.18
GPC1-202ENST00000420138 HOXA5P20719 270 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 RAB9AP51151 201 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 RANP62826 216 aaKnown RBP16.18■□□□□ 0.18
GPC1-202ENST00000420138 TEX38Q6PEX7 206 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 BTF3L4Q96K17 158 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 DUX5Q96PT3 197 aa16.18■□□□□ 0.18
GPC1-202ENST00000420138 CLPSL1A2RUU4 121 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 TRBV12-3P01733 135 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 TRGC1P0CF51 173 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 PSMB8P28062 276 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 GNG4P50150 75 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 FOXL1Q12952 345 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 C10orf99Q6UWK7 81 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 BPIFA4PQ86YQ2 179 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 PRSS22Q9GZN4 317 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 GNB4Q9HAV0 340 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 K7EN84 100 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 TYMSP04818 313 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 FAM3BP58499 235 aaPredicted RBP16.17■□□□□ 0.18
GPC1-202ENST00000420138 NPFFR1Q9GZQ6 430 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 RABAC1Q9UI14 185 aa16.17■□□□□ 0.18
GPC1-202ENST00000420138 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.16■□□□□ 0.18
GPC1-202ENST00000420138 BMPR1BO00238 502 aa16.16■□□□□ 0.18
GPC1-202ENST00000420138 SCGB2A2Q13296 93 aa16.16■□□□□ 0.18
GPC1-202ENST00000420138 CENPWQ5EE01 88 aa16.16■□□□□ 0.18
GPC1-202ENST00000420138 C17orf77Q96MU5 243 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms