RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 FAM57AQ8TBR7 257 aa12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 PRSS22Q9GZN4 317 aa12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 Q9UFV3 132 aa12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 MRGPRG-AS1Q2M3A8 158 aa12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 FAM162BQ5T6X4 162 aa12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 TMEM116Q8NCL8 245 aa12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 SRSF12Q8WXF0 261 aaKnown RBP12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 TMEM133Q9H2Q1 129 aa12.1□□□□□ -0.47
SEMA3B-203ENST00000419007 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 C19orf71A6NCJ1 209 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 NUDT3O95989 172 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 CRYGCP07315 174 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 FAM120AOSQ5T036 256 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 MED13LQ71F56 2210 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 IGHV1-69-2A0A0G2JMI3 117 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 LYNX1G3V0Z9 82 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 LYNX1P0DP58 116 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 TMEM155Q4W5P6 130 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 Q86TA4 180 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 LINC00311Q8N616 119 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 RASL11BQ9BPW5 248 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 SIGLEC9Q9Y336 463 aa12.09□□□□□ -0.47
SEMA3B-203ENST00000419007 PRRG2O14669 202 aa12.08□□□□□ -0.47
SEMA3B-203ENST00000419007 CNIH1O95406 144 aa12.08□□□□□ -0.47
SEMA3B-203ENST00000419007 UBE2V1Q13404 147 aa12.08□□□□□ -0.47
SEMA3B-203ENST00000419007 MUC15Q8N387 334 aa12.08□□□□□ -0.47
SEMA3B-203ENST00000419007 SLC25A39Q9BZJ4 359 aaPredicted RBP12.08□□□□□ -0.47
SEMA3B-203ENST00000419007 TMEM191AQ9H0A3 160 aa12.08□□□□□ -0.47
SEMA3B-203ENST00000419007 S4R3C0 116 aa12.08□□□□□ -0.47
SEMA3B-203ENST00000419007 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 ATRXP46100 2492 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 LRBAP50851 2863 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 FAM71F2Q6NXP2 309 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 TEX45Q8NA69 505 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 RNASE6Q93091 150 aaKnown RBP12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 C17orf77Q96MU5 243 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 MAP1LC3CQ9BXW4 147 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 A0A1W2PRD5 423 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 A0A1W2PRF3 423 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 A0A1W2PRM7 423 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 THBDP07204 575 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 IGFL3Q6UXB1 125 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 RNASE8Q8TDE3 154 aaKnown RBP12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 CHCHD1Q96BP2 118 aaKnown RBP12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
SEMA3B-203ENST00000419007 TLN1Q9Y490 2541 aaKnown RBP12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 PTPRQQ9UMZ3 2332 aa12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 VSTM5A8MXK1 200 aa12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 ZNF492Q9P255 531 aa12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 SOX21Q9Y651 276 aaPredicted RBP12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 CT83Q5H943 113 aa12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 OTORQ9NRC9 128 aa12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 F11RQ9Y624 299 aaKnown RBP12.07□□□□□ -0.48
SEMA3B-203ENST00000419007 SNAI2O43623 268 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 LIPFP07098 398 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 ARMS2P0C7Q2 107 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 FBLN7Q53RD9 439 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 CLEC2AQ6UVW9 174 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 CBY3A6NI87 242 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 IGLC1P0CG04 106 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 DLX6P56179 175 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 RPEQ96AT9 228 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 ST20Q9HBF5 79 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 CSMD1Q96PZ7 3565 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 TMSB15BA0A087X1C1 80 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 CFAP161Q6P656 301 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 IGFBPL1Q8WX77 278 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 ARHGAP32A7KAX9 2087 aa12.06□□□□□ -0.48
SEMA3B-203ENST00000419007 IGHV1-3A0A0C4DH29 117 aa12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 ZC2HC1AQ96GY0 325 aa12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 A0A1B0GUT8 65 aa12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 APOHP02749 345 aaPredicted RBP12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 TCTAP57738 103 aa12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 OR5AL1P0C617 328 aa12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 RNF151Q2KHN1 245 aa12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 PRSS3P2Q8NHM4 247 aa12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 GFRA4Q9GZZ7 299 aa12.05□□□□□ -0.48
SEMA3B-203ENST00000419007 MUC21A0A0G2JKD1 596 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 MUC21A0A140T8X8 626 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 SERTM2A0A1B0GWG4 89 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 MUC21Q5SSG8 566 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 NDFIP1Q9BT67 221 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 LOC389332A0A1B0GUA5 103 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 M0R3E3 92 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 C8orf31Q8N9H6 132 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 AP5S1Q9NUS5 200 aa12.04□□□□□ -0.48
SEMA3B-203ENST00000419007 A0A087X0K7 114 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 CRXO43186 299 aaPredicted RBP12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 IGLV2-11P01706 119 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 COTL1Q14019 142 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 NGBQ9NPG2 151 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 HSPB8Q9UJY1 196 aa12.03□□□□□ -0.48
SEMA3B-203ENST00000419007 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 265.8 ms