RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 TRBV6-1A0A0K0K1D8 114 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 CD5LO43866 347 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 PEMTQ9UBM1 199 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 RAB4BP61018 213 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 SMIM15Q7Z3B0 74 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 CIARTQ8N365 385 aaPredicted RBP6.57□□□□□ -1.36
USP54-203ENST00000418501 TMEM75Q8N9X5 138 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 DOPEY1Q5JWR5 2465 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 A0A1B0GW15 77 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 G3V318 75 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 IGHV3-23P01764 117 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 CTSGP08311 255 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 GP9P14770 177 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 TMEM78Q5T7P6 136 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 TOMM20LQ6UXN7 152 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 FAM231DQ6ZW35 169 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 C16orf92Q96LL3 132 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 PSMG3-AS1Q96PY0 264 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.57□□□□□ -1.36
USP54-203ENST00000418501 GCGP01275 180 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 SSBP2P81877 361 aaPredicted RBP6.57□□□□□ -1.36
USP54-203ENST00000418501 ASPHD1Q5U4P2 390 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 RASL11AQ6T310 242 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 C14orf144Q96I85 54 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 NEU1Q99519 415 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 ZNF492Q9P255 531 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 NAT8BQ9UHF3 227 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 TRAPPC1Q9Y5R8 145 aa6.57□□□□□ -1.36
USP54-203ENST00000418501 PRR27Q6MZM9 219 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 OR10J6PQ8NGY7 276 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 OCC1Q8TAD7 63 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 OVOL1O14753 267 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 IGHV4-59P01825 116 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 RIGQ13278 110 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 CT83Q5H943 113 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 KHDC1LQ5JSQ8 128 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 SIGLEC15Q6ZMC9 328 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 GOLT1AQ6ZVE7 132 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 PRNTQ86SH4 94 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 A0A1B0GV90 55 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 K7EMT4 169 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 GSX1Q9H4S2 264 aaPredicted RBP6.56□□□□□ -1.36
USP54-203ENST00000418501 DAZ1Q9NQZ3 744 aaKnown RBP6.56□□□□□ -1.36
USP54-203ENST00000418501 MRPL36Q9P0J6 103 aaKnown RBP6.56□□□□□ -1.36
USP54-203ENST00000418501 S4R3C0 116 aa6.56□□□□□ -1.36
USP54-203ENST00000418501 A0A087X0K7 114 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 FAM231BA6NCW3 169 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 GGTLC3B5MD39 225 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 HLA-DQA1P01909 254 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 ELOBQ15370 118 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 AMY1AP04745 511 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 EGR2P11161 476 aaPredicted RBP6.55□□□□□ -1.36
USP54-203ENST00000418501 SRSF1Q07955 248 aaKnown RBP eCLIP6.55□□□□□ -1.36
USP54-203ENST00000418501 IGHG4P01861 327 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 TMEM183AQ8IXX5 376 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 WFDC12Q8WWY7 111 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 TMEM160Q9NX00 188 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 PSG8Q9UQ74 426 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 RBAKDNA6NC62 111 aa6.55□□□□□ -1.36
USP54-203ENST00000418501 RPP21Q9H633 154 aaKnown RBP6.55□□□□□ -1.36
USP54-203ENST00000418501 IFITM10A6NMD0 228 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 HOXA3O43365 443 aaPredicted RBP6.54□□□□□ -1.36
USP54-203ENST00000418501 SNRPD3P62318 126 aaKnown RBP6.54□□□□□ -1.36
USP54-203ENST00000418501 PSG3Q16557 428 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 C19orf35Q6ZS72 473 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 ATP5L2Q7Z4Y8 100 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 ZNF414Q96IQ9 312 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 ASCL2Q99929 193 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 GFRA4Q9GZZ7 299 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 KLF12Q9Y4X4 402 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 CHEK1O14757 476 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 SRD5A1P18405 259 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 LEMD1Q68G75 181 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 ZNF343Q6P1L6 599 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 SIGLECL1Q8N7X8 197 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 PRDM13Q9H4Q3 707 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 IZUMO1RA6ND01 250 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 CMC4P56277 68 aaPredicted RBP6.54□□□□□ -1.36
USP54-203ENST00000418501 FABP9Q0Z7S8 132 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 OR5I1Q13606 314 aa6.54□□□□□ -1.36
USP54-203ENST00000418501 LGALS1P09382 135 aaKnown RBP6.53□□□□□ -1.36
USP54-203ENST00000418501 MAPK1IP1LQ8NDC0 245 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 ZNF738Q8NE65 137 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 UBE2E2Q96LR5 201 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 ZNF586Q9NXT0 402 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 TMEM189A5PLL7 270 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 SH2D7A6NKC9 451 aaPredicted RBP6.53□□□□□ -1.36
USP54-203ENST00000418501 TYMSP04818 313 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 NDUFA6P56556 154 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 GPHB5Q86YW7 130 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 PIFOQ8TCI5 191 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 ZNF503Q96F45 646 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 TGIF2-C20orf24A0A0A6YYL0 155 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 IGHV3-11P01762 117 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 TSPOP30536 169 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 CDPF1Q6NVV7 123 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 Q86TA4 180 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 OR2D3Q8NGH3 330 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 TSKUQ8WUA8 353 aa6.53□□□□□ -1.36
USP54-203ENST00000418501 LINC00477Q96M19 166 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms