RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 FRZBQ92765 325 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 IL22RA2Q969J5 263 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 UHRF2Q96PU4 802 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 UPK3BQ9BT76 320 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SLC25A32Q9H2D1 315 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RBKSQ9H477 322 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 VCX3AQ9NNX9 186 aa5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
HLA-DPA1-241ENST00000417724 CRYM-AS1A6NIL9 109 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 DISC1C4P0D8 188 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 H3BNG1 76 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RAB11AP62491 216 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SSBP1Q04837 148 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SMCO1Q147U7 214 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 HERC1Q15751 4861 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ESRGQ1W209 222 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ZNF738Q8NE65 137 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 C17orf77Q96MU5 243 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SLC25A39Q9BZJ4 359 aaPredicted RBP5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 NOP10Q9NPE3 64 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ZNF586Q9NXT0 402 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GPR132Q9UNW8 380 aa5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 MRPS16Q9Y3D3 137 aaKnown RBP5.44□□□□□ -1.54
HLA-DPA1-241ENST00000417724 IGKV1OR2-108A0A075B7D4 117 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 A0A0B4J2A0 478 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 PIGBOS1A0A0B4J2F0 54 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 A0A0J9YY99 117 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ZNF701M0R085 212 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 IFNA5P01569 189 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 AKR1C4P17516 323 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ORM2P19652 201 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 XGP55808 180 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 VBP1P61758 197 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 NCS1P62166 190 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 HIST1H1AQ02539 215 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 FGL1Q08830 312 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 Q5VSD8 79 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 IGFL4Q6B9Z1 124 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 CDPF1Q6NVV7 123 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RNF182Q8N6D2 247 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 THAP8Q8NA92 274 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 BPIFCQ8NFQ6 507 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 OR8A1Q8NGG7 326 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 OR1S1Q8NH92 325 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TMEM263Q8WUH6 116 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 AP3S1Q92572 193 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TMEM147Q9BVK8 224 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 EXTL2Q9UBQ6 330 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SHPKQ9UHJ6 478 aa5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 FLG2Q5D862 2391 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SRRM2Q9UQ35 2752 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 A0A087WXM4 84 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TRAV8-2A0A0B4J237 113 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 H7BYZ3 331 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RPL7P18124 248 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 CDKN1BP46527 198 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 LINC00315P59091 139 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ERVFC1-1P60608 527 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RPP30P78346 268 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SRPXP78539 464 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 MRPS10P82664 201 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 FAAP20Q6NZ36 180 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 LYZL2Q7Z4W2 148 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 CCDC28AQ8IWP9 274 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 LINC00612Q8N6U2 182 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 LRRC20Q8TCA0 184 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RNASE8Q8TDE3 154 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SCGB3A2Q96PL1 93 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 PRRT1Q99946 306 aa5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 PAIP2BQ9ULR5 123 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA1-241ENST00000417724 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 MED6O75586 246 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ATP6V1G2O95670 118 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RLN2P04090 185 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 AKAIN1P0CW23 69 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 ANXA3P12429 323 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 CXCL3P19876 107 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 HOXA5P20719 270 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 RAP2BP61225 183 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 PSG3Q16557 428 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 Q6ZRN7 208 aaPredicted RBP5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 S100A7AQ86SG5 101 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 CIB3Q96Q77 187 aaPredicted RBP5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 C20orf144Q9BQM9 153 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 FUNDC2Q9BWH2 189 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 PRR13Q9NZ81 148 aa5.41□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GAGE12BA1L429 117 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SNURFLB1AK76 121 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 FAM229AH3BQW9 127 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 SIVA1O15304 175 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GAGE7O76087 117 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GAGE12FP0CL80 117 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GAGE12GP0CL81 117 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GAGE12IP0CL82 117 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 IAPPP10997 89 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 GATA2P23769 480 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 AKR1C1Q04828 323 aa5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 TMEM182Q6ZP80 229 aaPredicted RBP5.4□□□□□ -1.54
HLA-DPA1-241ENST00000417724 NFE4Q86UQ8 179 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms