RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 C19orf54Q5BKX5 351 aa8.3□□□□□ -1.08
SMPD4P1-201ENST00000416717 LINC01551Q86U37 167 aa8.3□□□□□ -1.08
SMPD4P1-201ENST00000416717 C15orf54Q8N8G6 183 aa8.3□□□□□ -1.08
SMPD4P1-201ENST00000416717 STXBP6Q8NFX7 210 aa8.3□□□□□ -1.08
SMPD4P1-201ENST00000416717 SHANK2-AS3Q9BTD1 123 aa8.3□□□□□ -1.08
SMPD4P1-201ENST00000416717 A0A087WWC5 75 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 PGPA6NDG6 321 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 HELTA6NFD8 242 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 PPP5D1E7EU14 171 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 PF4V1P10720 104 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 ATP5G2Q06055 141 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 ZNF329Q86UD4 541 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 OCC1Q8TAD7 63 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 EEF1AKMT3Q96AZ1 226 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 SGK494Q96LW2 274 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 C17orf77Q96MU5 243 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 ZNF586Q9NXT0 402 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 ARL2-SNX15V9GYD0 113 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 TGIF2-C20orf24A0A0A6YYL0 155 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 TRAV34A0A0B4J273 112 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 H3BRN7 92 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 FSHBP01225 129 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 IGHV3-11P01762 117 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 IGF1P05019 195 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 SLC25A5P05141 298 aaKnown RBP8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 C11orf52Q96A22 123 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 TXN2Q99757 166 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 KLK15Q9H2R5 256 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 TUBA4BQ9H853 241 aa8.29□□□□□ -1.08
SMPD4P1-201ENST00000416717 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 J3KRW8 73 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 ZNF207O43670 478 aaKnown RBP8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 SCGB2A1O75556 95 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 MT-ND4LP03901 98 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 CXCL1P09341 107 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 RPL15P61313 204 aaKnown RBP8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 ELOBQ15370 118 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 CENPWQ5EE01 88 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 NHLRC2Q8NBF2 726 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 IGHV3OR16-13A0A075B7E8 117 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 IGHV3-49A0A0A0MS15 119 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 IGHV3-74A0A0B4J1X5 117 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 IGHV3-66A0A0C4DH42 116 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 CLDN34H7C241 214 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 K7EN84 100 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 AP4M1O00189 453 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 PPIFP30405 207 aaKnown RBP8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 OR5I1Q13606 314 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 TOMM20LQ6UXN7 152 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 Q6YL49 198 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 BPIFA4PQ86YQ2 179 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 EXOC3-AS1Q8N2X6 119 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 Q9H3A6 140 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 MYO9AB2RTY4 2548 aa8.28□□□□□ -1.08
SMPD4P1-201ENST00000416717 TRBV7-1A0A0A6YYK4 115 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 H7BYZ3 331 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 PEX7O00628 323 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 TRBV12-3P01733 135 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 GNG4P50150 75 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 CRIP2P52943 208 aaPredicted RBP8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 C10orf99Q6UWK7 81 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 RABAC1Q9UI14 185 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 TGOLN2O43493 480 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 HIST1H1EP10412 219 aaKnown RBP8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 RAB5AP20339 215 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 OR4F17Q8NGA8 305 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 C14orf144Q96I85 54 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 ZNF414Q96IQ9 312 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 YPEL4Q96NS1 127 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 OR5B12Q96R08 314 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 NOTCH2Q04721 2471 aa8.27□□□□□ -1.09
SMPD4P1-201ENST00000416717 FAM223BA6NKX1 122 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 BMPR1BO00238 502 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 SLC17A3O00476 420 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 MGST1P10620 155 aaKnown RBP8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 MYCNOSP40205 109 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 KLK9Q2XQG4 91 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 FAM223AQ8IWN6 122 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 OR5R1Q8NH85 324 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 TMEM14CQ9P0S9 112 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 KLK9Q9UKQ9 250 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 EPDR1Q9UM22 224 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 CUBNO60494 3623 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 ISLRO14498 428 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 RPS10P46783 165 aaKnown RBP8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 GALR1P47211 349 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 CNN1P51911 297 aaKnown RBP8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 OR8I2Q8N0Y5 310 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 SIGLECL1Q8N7X8 197 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 SFRP2Q96HF1 295 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 CTDSP1Q9GZU7 261 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
SMPD4P1-201ENST00000416717 CXorf65A6NEN9 183 aa8.25□□□□□ -1.09
SMPD4P1-201ENST00000416717 IGLC2P0DOY2 106 aa8.25□□□□□ -1.09
SMPD4P1-201ENST00000416717 ARL3P36405 182 aa8.25□□□□□ -1.09
SMPD4P1-201ENST00000416717 C9orf139Q6ZV77 190 aa8.25□□□□□ -1.09
SMPD4P1-201ENST00000416717 TMEM242Q9NWH2 141 aa8.25□□□□□ -1.09
SMPD4P1-201ENST00000416717 GAR1Q9NY12 217 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms