RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 RNF24Q9Y225 148 aa10.04□□□□□ -0.8
CNN3-203ENST00000415017 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
CNN3-203ENST00000415017 TRAV1-1A0A0B4J248 108 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 CTXND1A0A1B0GTU2 59 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 GP9P14770 177 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 FHITP49789 147 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 PRR31Q5SQ13 230 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 LYPD6BQ8NI32 183 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 DNAH3Q8TD57 4116 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 RAB24Q969Q5 203 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 GPR82Q96P67 336 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 SLC25A2Q9BXI2 301 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 ACTR3CQ9C0K3 210 aaPredicted RBP10.03□□□□□ -0.8
CNN3-203ENST00000415017 SMAD5-AS1Q9Y6J3 95 aa10.03□□□□□ -0.8
CNN3-203ENST00000415017 TRAV5A0A0B4J249 113 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 CD5P06127 495 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 IGLC2P0DOY2 106 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 CDC34P49427 236 aaPredicted RBP10.02□□□□□ -0.81
CNN3-203ENST00000415017 INSL3P51460 131 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 DEFB114Q30KQ6 69 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 FAM74A1Q5RGS3 127 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 FAM122CQ6P4D5 195 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 RNF141Q8WVD5 230 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 ELOVL1Q9BW60 279 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 TMEM231Q9H6L2 316 aa10.02□□□□□ -0.81
CNN3-203ENST00000415017 IGHV3OR16-13A0A075B7E8 117 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 A0A087X0K7 114 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 IGHV3-74A0A0B4J1X5 117 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 BMI1P35226 326 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 LEMD1Q68G75 181 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 STXBP6Q8NFX7 210 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 OR2K2Q8NGT1 345 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 SAT2Q96F10 170 aaPredicted RBP10.01□□□□□ -0.81
CNN3-203ENST00000415017 GRAMD2BQ96HH9 432 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 MCRIP2Q9BUT9 160 aaKnown RBP10.01□□□□□ -0.81
CNN3-203ENST00000415017 NBEAL1Q6ZS30 2694 aa10.01□□□□□ -0.81
CNN3-203ENST00000415017 IGHV3-49A0A0A0MS15 119 aa10□□□□□ -0.81
CNN3-203ENST00000415017 TRAV25A0A0B4J276 109 aa10□□□□□ -0.81
CNN3-203ENST00000415017 A0A1W2PPV4 95 aa10□□□□□ -0.81
CNN3-203ENST00000415017 RGS13O14921 159 aa10□□□□□ -0.81
CNN3-203ENST00000415017 IFNA7P01567 189 aa10□□□□□ -0.81
CNN3-203ENST00000415017 RPL7P18124 248 aaKnown RBP10□□□□□ -0.81
CNN3-203ENST00000415017 PMS2P11Q13670 270 aa10□□□□□ -0.81
CNN3-203ENST00000415017 PQLC2Q6ZP29 291 aa10□□□□□ -0.81
CNN3-203ENST00000415017 BPIFA4PQ86YQ2 179 aa10□□□□□ -0.81
CNN3-203ENST00000415017 LRRC20Q8TCA0 184 aa10□□□□□ -0.81
CNN3-203ENST00000415017 FXYD5Q96DB9 178 aa10□□□□□ -0.81
CNN3-203ENST00000415017 NARS2Q96I59 477 aaKnown RBP10□□□□□ -0.81
CNN3-203ENST00000415017 HRH4Q9H3N8 390 aa10□□□□□ -0.81
CNN3-203ENST00000415017 SLC25A22Q9H936 323 aa10□□□□□ -0.81
CNN3-203ENST00000415017 SORL1Q92673 2214 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 TRAV2A0A0B4J234 112 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 IGHV3-66A0A0C4DH42 116 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 HELTA6NFD8 242 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 H3BQ15 152 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 TSPAN4O14817 238 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 TAS2R45P59539 299 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 KHDC3LQ587J8 217 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 C9orf66Q5T8R8 295 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 SIGLEC15Q6ZMC9 328 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 ZNF767PQ75MW2 155 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 OR8I2Q8N0Y5 310 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 FAM213BQ8TBF2 198 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 DCANP1Q8TF63 244 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 OR51M1Q9H341 326 aa9.99□□□□□ -0.81
CNN3-203ENST00000415017 MAP1LC3B2A6NCE7 125 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 SOCS3O14543 225 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 EIF3GO75821 320 aaKnown RBP eCLIP9.98□□□□□ -0.81
CNN3-203ENST00000415017 H2AFB1P0C5Y9 115 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 HIST1H1EP10412 219 aaKnown RBP9.98□□□□□ -0.81
CNN3-203ENST00000415017 CD33P20138 364 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 CD300EQ496F6 205 aaPredicted RBP9.98□□□□□ -0.81
CNN3-203ENST00000415017 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
CNN3-203ENST00000415017 TCF24Q7RTU0 167 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 TMEM61Q8N0U2 210 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 MAP1LC3BQ9GZQ8 125 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 ZNF586Q9NXT0 402 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 UBQLN2Q9UHD9 624 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 MGAM2Q2M2H8 2515 aa9.98□□□□□ -0.81
CNN3-203ENST00000415017 ZNF785A8K8V0 405 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 ZNF253O75346 499 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 SAP30O75446 220 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 NDUFB4O95168 129 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 CXorf1O96002 111 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 NMBP08949 121 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 ARL14EPLP0DKL9 152 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 PYYP10082 97 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 GCHFRP30047 84 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 GALR1P47211 349 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 MEOX2P50222 304 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 BLOC1S1P78537 153 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 PDE6HQ13956 83 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 GUK1Q16774 197 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 PAXXQ9BUH6 204 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 ZNF256Q9Y2P7 627 aaPredicted RBP9.97□□□□□ -0.81
CNN3-203ENST00000415017 FBN3Q75N90 2809 aa9.97□□□□□ -0.81
CNN3-203ENST00000415017 TRBV19A0A075B6N1 114 aa9.96□□□□□ -0.82
CNN3-203ENST00000415017 IZUMO1RA6ND01 250 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms