RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 CCDC140Q96MF4 163 aa12.9□□□□□ -0.34
SCAMP4-204ENST00000414057 RNF24Q9Y225 148 aa12.9□□□□□ -0.34
SCAMP4-204ENST00000414057 S4R3C0 116 aa12.9□□□□□ -0.34
SCAMP4-204ENST00000414057 A0A1B0GV50 99 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 KRBOX1C9JBD0 128 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 TGOLN2O43493 480 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 NDUFS6O75380 124 aaKnown RBP12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 CLEC3BP05452 202 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 CD5P06127 495 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 C8orf88P0DMB2 117 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 ORM2P19652 201 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 GPR183P32249 361 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 CCL20P78556 96 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 RELQ04864 619 aaPredicted RBP12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 PATE2Q6UY27 113 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 ZNF600Q6ZNG1 722 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 STXBP6Q8NFX7 210 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 OR1B1Q8NGR6 318 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 RNF125Q96EQ8 232 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 EIF5A2Q9GZV4 153 aaKnown RBP12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 HIGD1AQ9Y241 93 aa12.89□□□□□ -0.35
SCAMP4-204ENST00000414057 GP9P14770 177 aa12.88□□□□□ -0.35
SCAMP4-204ENST00000414057 LYZP61626 148 aa12.88□□□□□ -0.35
SCAMP4-204ENST00000414057 DEFA5Q01523 94 aa12.88□□□□□ -0.35
SCAMP4-204ENST00000414057 TOR2AQ5JU69 321 aa12.88□□□□□ -0.35
SCAMP4-204ENST00000414057 ZNF506Q5JVG8 444 aa12.88□□□□□ -0.35
SCAMP4-204ENST00000414057 LINC00305Q7Z4B0 112 aa12.88□□□□□ -0.35
SCAMP4-204ENST00000414057 MRPL27Q9P0M9 148 aaKnown RBP12.88□□□□□ -0.35
SCAMP4-204ENST00000414057 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 ANKRD34BA5PLL1 514 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 IGHV3-23P01764 117 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 IL4P05112 153 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 BCL2P10415 239 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 ADMP35318 185 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 CLEC19AQ6UXS0 136 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 MIR17HGQ75NE6 70 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 TXNDC17Q9BRA2 123 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 SCRT1Q9BWW7 348 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 TREM1Q9NP99 234 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 TMEM167BQ9NRX6 74 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 DOK5Q9P104 306 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 ARL2-SNX15V9GYD0 113 aa12.87□□□□□ -0.35
SCAMP4-204ENST00000414057 SPATA31B1PQ5VZV4 182 aa12.86□□□□□ -0.35
SCAMP4-204ENST00000414057 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
SCAMP4-204ENST00000414057 ASCL2Q99929 193 aa12.86□□□□□ -0.35
SCAMP4-204ENST00000414057 CHRDL1Q9BU40 450 aa12.86□□□□□ -0.35
SCAMP4-204ENST00000414057 PEF1Q9UBV8 284 aaKnown RBP12.86□□□□□ -0.35
SCAMP4-204ENST00000414057 LOC102723971A0A1B0GUV8 181 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 BMPR1BO00238 502 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 GCHFRP30047 84 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 IQCF2Q8IXL9 164 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 VAX2Q9UIW0 290 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 OR7C2O60412 319 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 ARL3P36405 182 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 HAGHQ16775 308 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 SUN5Q8TC36 379 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 NARS2Q96I59 477 aaKnown RBP12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 SLC25A2Q9BXI2 301 aa12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 SLC25A39Q9BZJ4 359 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 PUS1Q9Y606 427 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCAMP4-204ENST00000414057 TMEM218A2RU14 115 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 IGLV1-51P01701 117 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 SRSF3P84103 164 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 MEF2BQ02080 365 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 KLF5Q13887 457 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 ICAM4Q14773 271 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 OR9G4Q8NGQ1 327 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 FAM167A-AS1Q96KT0 104 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 UHRF2Q96PU4 802 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 SHANK2-AS3Q9BTD1 123 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 SLC35B3Q9H1N7 401 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 TMPRSS5Q9H3S3 457 aa12.84□□□□□ -0.35
SCAMP4-204ENST00000414057 COL7A1Q02388 2944 aa12.83□□□□□ -0.36
SCAMP4-204ENST00000414057 H3BRN7 92 aa12.83□□□□□ -0.36
SCAMP4-204ENST00000414057 RPEL1Q2QD12 228 aa12.83□□□□□ -0.36
SCAMP4-204ENST00000414057 OR51M1Q9H341 326 aa12.83□□□□□ -0.36
SCAMP4-204ENST00000414057 ZMAT4Q9H898 229 aa12.83□□□□□ -0.36
SCAMP4-204ENST00000414057 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
SCAMP4-204ENST00000414057 RABAC1Q9UI14 185 aa12.83□□□□□ -0.36
SCAMP4-204ENST00000414057 NDUFA4O00483 81 aa12.82□□□□□ -0.36
SCAMP4-204ENST00000414057 EIF3GO75821 320 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCAMP4-204ENST00000414057 USF2Q15853 346 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-204ENST00000414057 RARRES2Q99969 163 aa12.82□□□□□ -0.36
SCAMP4-204ENST00000414057 PAXXQ9BUH6 204 aa12.82□□□□□ -0.36
SCAMP4-204ENST00000414057 TMEM231Q9H6L2 316 aa12.82□□□□□ -0.36
SCAMP4-204ENST00000414057 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
SCAMP4-204ENST00000414057 PEMTQ9UBM1 199 aa12.82□□□□□ -0.36
SCAMP4-204ENST00000414057 GGCTO75223 188 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-204ENST00000414057 SFTA3P0C7M3 94 aa12.81□□□□□ -0.36
SCAMP4-204ENST00000414057 FRMD6-AS1P0C7T7 363 aa12.81□□□□□ -0.36
SCAMP4-204ENST00000414057 SYNJ2BPP57105 145 aa12.81□□□□□ -0.36
SCAMP4-204ENST00000414057 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
SCAMP4-204ENST00000414057 TOMM20LQ6UXN7 152 aa12.81□□□□□ -0.36
SCAMP4-204ENST00000414057 SBSPONQ8IVN8 264 aa12.81□□□□□ -0.36
SCAMP4-204ENST00000414057 RXFP4Q8TDU9 374 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms