RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SPTAN1Q13813 2472 aaKnown RBP7.54□□□□□ -1.2
SNHG3-201ENST00000413987 OR5B21A6NL26 309 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 ZNF324O75467 553 aaPredicted RBP7.54□□□□□ -1.2
SNHG3-201ENST00000413987 ATP5G3P48201 142 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 PCBD1P61457 104 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 DAZAP2Q15038 168 aaPredicted RBP7.54□□□□□ -1.2
SNHG3-201ENST00000413987 KRTAP27-1Q3LI81 207 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 LRRC10Q5BKY1 277 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 Q75L30 129 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 C11orf45Q8TAV5 145 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 CST9LQ9H4G1 147 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 A0A1W2PS18 150 aa7.53□□□□□ -1.2
SNHG3-201ENST00000413987 CCL21O00585 134 aa7.53□□□□□ -1.2
SNHG3-201ENST00000413987 C3orf79P0CE67 100 aa7.53□□□□□ -1.2
SNHG3-201ENST00000413987 ZNF114Q8NC26 417 aa7.53□□□□□ -1.2
SNHG3-201ENST00000413987 TRAV9-2A0A087WT02 112 aa7.52□□□□□ -1.2
SNHG3-201ENST00000413987 C9JCJ5 164 aa7.52□□□□□ -1.2
SNHG3-201ENST00000413987 FA2HQ7L5A8 372 aa7.52□□□□□ -1.2
SNHG3-201ENST00000413987 MKXQ8IYA7 352 aa7.52□□□□□ -1.2
SNHG3-201ENST00000413987 NAT8BQ9UHF3 227 aa7.52□□□□□ -1.2
SNHG3-201ENST00000413987 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.2
SNHG3-201ENST00000413987 PMS2P5A8MQ11 134 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.52□□□□□ -1.21
SNHG3-201ENST00000413987 CXorf1O96002 111 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 BCL3P20749 454 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 CA7P43166 264 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 ZNF83P51522 516 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 LTC4SQ16873 150 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 OR5A2Q8NGI9 324 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 DERL1Q9BUN8 251 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 SLC25A39Q9BZJ4 359 aaPredicted RBP7.52□□□□□ -1.21
SNHG3-201ENST00000413987 ICE1Q9Y2F5 2266 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.21
SNHG3-201ENST00000413987 CENPEQ02224 2701 aa7.52□□□□□ -1.21
SNHG3-201ENST00000413987 A0A087WX48 190 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 F2Z2F3 143 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 TMEM178BH3BS89 294 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 HLA-DQA1P01909 254 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 GNLYP22749 145 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 REG1BP48304 166 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 DLX1P56177 255 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 TFF3Q07654 80 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 TIGITQ495A1 244 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 LDLRAD2Q5SZI1 272 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 MOB1BQ7L9L4 216 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 ANKHD1Q8IWZ3 2542 aaKnown RBP7.51□□□□□ -1.21
SNHG3-201ENST00000413987 TENM4Q6N022 2769 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 CHD3Q12873 2000 aaKnown RBP7.51□□□□□ -1.21
SNHG3-201ENST00000413987 PLCE1Q9P212 2302 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 TRGV10A0A0A0MS01 117 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 CA2P00918 260 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 ELANEP08246 267 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 CECR9P0C854 216 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 GLRXP35754 106 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 PLP2Q04941 152 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 FAM162BQ5T6X4 162 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 OR1L1Q8NH94 360 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 PIFOQ8TCI5 191 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 MEGF9Q9H1U4 602 aa7.51□□□□□ -1.21
SNHG3-201ENST00000413987 HEATR1Q9H583 2144 aaKnown RBP7.51□□□□□ -1.21
SNHG3-201ENST00000413987 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 TRBV20OR9-2A0A075B6H5 130 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 IGHV1-18A0A0C4DH31 117 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 IGHV3-64DA0A0J9YX35 117 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 M0R1B8 84 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 GNG7O60262 68 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 UBR5O95071 2799 aaPredicted RBP7.5□□□□□ -1.21
SNHG3-201ENST00000413987 LINC00869P0C866 280 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 MYOD1P15172 320 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 THBS3P49746 956 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 WDR82Q6UXN9 313 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 C11orf52Q96A22 123 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 FBXL15Q9H469 300 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 MAP1AP78559 2803 aaPredicted RBP7.5□□□□□ -1.21
SNHG3-201ENST00000413987 SCO2A0A1W2PP80 73 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 C15orf61A6NNL5 157 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 IGKV3-15P01624 115 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 IGLV2-14P01704 120 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 LAGE3Q14657 143 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 TMEM136Q6ZRR5 245 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 ZNRF2Q8NHG8 242 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 TSKUQ8WUA8 353 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 HS3ST6Q96QI5 342 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 SLC25A15Q9Y619 301 aa7.5□□□□□ -1.21
SNHG3-201ENST00000413987 LRRK2Q5S007 2527 aa7.49□□□□□ -1.21
SNHG3-201ENST00000413987 OPRK1P41145 380 aa7.49□□□□□ -1.21
SNHG3-201ENST00000413987 UBE2E1P51965 193 aa7.49□□□□□ -1.21
SNHG3-201ENST00000413987 OR8I2Q8N0Y5 310 aa7.49□□□□□ -1.21
SNHG3-201ENST00000413987 EEF1AKMT3Q96AZ1 226 aa7.49□□□□□ -1.21
SNHG3-201ENST00000413987 UBE2E2Q96LR5 201 aa7.49□□□□□ -1.21
SNHG3-201ENST00000413987 V9GYV3 84 aa7.49□□□□□ -1.21
SNHG3-201ENST00000413987 PKDREJQ9NTG1 2253 aa7.49□□□□□ -1.21
SNHG3-201ENST00000413987 CSMD1Q96PZ7 3565 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 H0YJW9 148 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 RRHO14718 337 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 RASL11AQ6T310 242 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 Q6ZVH6 145 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 IL1F10Q8WWZ1 152 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms