RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 ORM2P19652 201 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 S100A5P33763 92 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 SPINK13Q1W4C9 94 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 PYDC2Q56P42 97 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 SAMD13Q5VXD3 122 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 GGNBP1Q5YKI7 109 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 RNF182Q8N6D2 247 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 LRTM2Q8N967 370 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 TMEM208Q9BTX3 173 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 NDUFA13Q9P0J0 144 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 SLC45A2Q9UMX9 530 aa17.15■□□□□ 0.34
AC005540.1-201ENST00000413911 SLC25A6P12236 298 aa17.14■□□□□ 0.33
AC005540.1-201ENST00000413911 TMEM128Q5BJH2 165 aa17.14■□□□□ 0.33
AC005540.1-201ENST00000413911 SOHLH1Q5JUK2 328 aa17.14■□□□□ 0.33
AC005540.1-201ENST00000413911 PLAC8L1A1L4L8 177 aa17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 WRBO00258 174 aa17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 CFDP00746 253 aaPredicted RBP17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 AZU1P20160 251 aa17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 VAMP1P23763 118 aa17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 FAUP35544 74 aaKnown RBP17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 BAP18Q8IXM2 172 aa17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 TOMM5Q8N4H5 51 aa17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 OR4D5Q8NGN0 318 aa17.13■□□□□ 0.33
AC005540.1-201ENST00000413911 SYNGR2O43760 224 aa17.12■□□□□ 0.33
AC005540.1-201ENST00000413911 TNP2Q05952 138 aa17.12■□□□□ 0.33
AC005540.1-201ENST00000413911 FCN2Q15485 313 aa17.12■□□□□ 0.33
AC005540.1-201ENST00000413911 OR1B1Q8NGR6 318 aa17.12■□□□□ 0.33
AC005540.1-201ENST00000413911 C15orf53Q8NAA6 179 aa17.11■□□□□ 0.33
AC005540.1-201ENST00000413911 BPIFCQ8NFQ6 507 aa17.11■□□□□ 0.33
AC005540.1-201ENST00000413911 SRRQ9GZT4 340 aa17.11■□□□□ 0.33
AC005540.1-201ENST00000413911 TMED3Q9Y3Q3 217 aa17.11■□□□□ 0.33
AC005540.1-201ENST00000413911 TRAV12-2A0A075B6T6 113 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 LYRM9A8MSI8 78 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 H3BP45 60 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 MED6O75586 246 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 INSP01308 110 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 DEFB130BP0DP73 79 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 DEFB130AP0DP74 79 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 PRB4P10163 310 aaPredicted RBP17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 AP3S2P59780 193 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 PPP1R1AQ13522 171 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 SPANXN5Q5MJ07 72 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 ACOT7LQ6ZUV0 252 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 CIB3Q96Q77 187 aaPredicted RBP17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 TMEM147Q9BVK8 224 aa17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 SLC25A39Q9BZJ4 359 aaPredicted RBP17.1■□□□□ 0.33
AC005540.1-201ENST00000413911 H3BRN7 92 aa17.09■□□□□ 0.33
AC005540.1-201ENST00000413911 DUSP14O95147 198 aaKnown RBP17.09■□□□□ 0.33
AC005540.1-201ENST00000413911 FAM3BP58499 235 aaPredicted RBP17.09■□□□□ 0.33
AC005540.1-201ENST00000413911 ZNRF2Q8NHG8 242 aa17.09■□□□□ 0.33
AC005540.1-201ENST00000413911 DEDD2Q8WXF8 326 aa17.09■□□□□ 0.33
AC005540.1-201ENST00000413911 APOBP04114 4563 aaKnown RBP17.08■□□□□ 0.33
AC005540.1-201ENST00000413911 SFT2D2O95562 160 aa17.08■□□□□ 0.32
AC005540.1-201ENST00000413911 HOXB5P09067 269 aa17.08■□□□□ 0.32
AC005540.1-201ENST00000413911 TSPOP30536 169 aa17.08■□□□□ 0.32
AC005540.1-201ENST00000413911 AKR1C1Q04828 323 aa17.08■□□□□ 0.32
AC005540.1-201ENST00000413911 FGL1Q08830 312 aa17.08■□□□□ 0.32
AC005540.1-201ENST00000413911 SPANXN2Q5MJ10 180 aa17.08■□□□□ 0.32
AC005540.1-201ENST00000413911 GPR82Q96P67 336 aa17.08■□□□□ 0.32
AC005540.1-201ENST00000413911 SLC25A21Q9BQT8 299 aaPredicted RBP17.08■□□□□ 0.32
AC005540.1-201ENST00000413911 DNAH5Q8TE73 4624 aa17.07■□□□□ 0.32
AC005540.1-201ENST00000413911 PIGBOS1A0A0B4J2F0 54 aa17.07■□□□□ 0.32
AC005540.1-201ENST00000413911 RPP30P78346 268 aaKnown RBP17.07■□□□□ 0.32
AC005540.1-201ENST00000413911 SDHCQ99643 169 aaPredicted RBP17.07■□□□□ 0.32
AC005540.1-201ENST00000413911 ATG101Q9BSB4 218 aa17.07■□□□□ 0.32
AC005540.1-201ENST00000413911 SHANK2-AS3Q9BTD1 123 aa17.07■□□□□ 0.32
AC005540.1-201ENST00000413911 NBDYA0A0U1RRE5 68 aa17.06■□□□□ 0.32
AC005540.1-201ENST00000413911 F5H768 121 aa17.06■□□□□ 0.32
AC005540.1-201ENST00000413911 TMEM144Q7Z5S9 345 aa17.06■□□□□ 0.32
AC005540.1-201ENST00000413911 ZNF738Q8NE65 137 aa17.06■□□□□ 0.32
AC005540.1-201ENST00000413911 BOLA2-SMG1P6H3BVE0 249 aa17.05■□□□□ 0.32
AC005540.1-201ENST00000413911 CYP2G1PQ6ZSU1 146 aa17.05■□□□□ 0.32
AC005540.1-201ENST00000413911 STRAPQ9Y3F4 350 aaKnown RBP17.05■□□□□ 0.32
AC005540.1-201ENST00000413911 PMS2P5A8MQ11 134 aa17.04■□□□□ 0.32
AC005540.1-201ENST00000413911 NUDT3O95989 172 aa17.04■□□□□ 0.32
AC005540.1-201ENST00000413911 BAK1Q16611 211 aa17.04■□□□□ 0.32
AC005540.1-201ENST00000413911 OR8A1Q8NGG7 326 aa17.04■□□□□ 0.32
AC005540.1-201ENST00000413911 UHRF2Q96PU4 802 aa17.04■□□□□ 0.32
AC005540.1-201ENST00000413911 LINC00588Q9Y4M8 146 aa17.04■□□□□ 0.32
AC005540.1-201ENST00000413911 ADAP1O75689 374 aa17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 CCNKO75909 580 aa17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 IL5P05113 134 aa17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 CXCL3P19876 107 aa17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 B2MP61769 119 aa17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 POLR2GP62487 172 aaKnown RBP eCLIP17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 ID3Q02535 119 aa17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 HIST1H1AQ02539 215 aaPredicted RBP17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 LINC01587Q99440 93 aa17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 HIGD1AQ9Y241 93 aa17.03■□□□□ 0.32
AC005540.1-201ENST00000413911 SMCO3A2RU48 225 aa17.02■□□□□ 0.32
AC005540.1-201ENST00000413911 C16orf90A8MZG2 172 aa17.02■□□□□ 0.32
AC005540.1-201ENST00000413911 PLP1P60201 277 aa17.02■□□□□ 0.32
AC005540.1-201ENST00000413911 C6orf223Q8N319 242 aa17.02■□□□□ 0.32
AC005540.1-201ENST00000413911 RNF141Q8WVD5 230 aa17.02■□□□□ 0.32
AC005540.1-201ENST00000413911 CBY3A6NI87 242 aa17.01■□□□□ 0.31
AC005540.1-201ENST00000413911 HYPMO75409 117 aa17.01■□□□□ 0.31
AC005540.1-201ENST00000413911 ATP5G1P05496 136 aa17.01■□□□□ 0.31
AC005540.1-201ENST00000413911 RPL7P18124 248 aaKnown RBP17.01■□□□□ 0.31
AC005540.1-201ENST00000413911 ATP5G3P48201 142 aa17.01■□□□□ 0.31
AC005540.1-201ENST00000413911 PATE2Q6UY27 113 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms