RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ABCA7Q8IZY2 2146 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 TRGV11A0A075B6L2 103 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 TRAV3A0A0B4J244 114 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 FXYD7P58549 80 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 PRB3Q04118 309 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 PHLDA1Q8WV24 401 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 KIF26BQ2KJY2 2108 aa11.23□□□□□ -0.61
SMARCA4-202ENST00000413806 LILRA1O75019 489 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 NPC2P61916 151 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 MST1LQ2TV78 715 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 PPDPFLQ8WWR9 84 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 MCRIP2Q9BUT9 160 aaKnown RBP11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 TCRAP04437 139 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 GAGE2AQ6NT46 116 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 NUP35Q8NFH5 326 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 C15orf62A8K5M9 175 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 M0R1W7 72 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 CD24P25063 80 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 C10orf55Q5SWW7 151 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 TRAV41A0A0B4J266 112 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 TRAV8-3A0A0A6YYJ7 113 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 TRACP01848 142 aa11.22□□□□□ -0.61
SMARCA4-202ENST00000413806 RP1P56715 2156 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 IGKV1D-17A0A075B6S4 117 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 NCR2O95944 276 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 NTF4P34130 210 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 LCNL1Q6ZST4 164 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 TMEM8BA6NDV4 472 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 H3BMM0 161 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 DSCR9P59020 149 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 UBE2WQ96B02 151 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 SCRT1Q9BWW7 348 aa11.21□□□□□ -0.61
SMARCA4-202ENST00000413806 C9JQL5 133 aa11.21□□□□□ -0.62
SMARCA4-202ENST00000413806 VMO1Q7Z5L0 202 aa11.21□□□□□ -0.62
SMARCA4-202ENST00000413806 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.62
SMARCA4-202ENST00000413806 ZNF581Q9P0T4 197 aa11.21□□□□□ -0.62
SMARCA4-202ENST00000413806 ALPK2Q86TB3 2170 aa11.21□□□□□ -0.62
SMARCA4-202ENST00000413806 HEATR5BQ9P2D3 2071 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 A0A1B0GUS0 222 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 CD28P10747 220 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 EFNA4P52798 201 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 SPSB3Q6PJ21 355 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 BOD1L2Q8IYS8 172 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 SRSF8Q9BRL6 282 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 FREM3P0C091 2139 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 PLAURQ03405 335 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 PMS2P5A8MQ11 134 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 PPIFP30405 207 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 CFAP161Q6P656 301 aa11.2□□□□□ -0.62
SMARCA4-202ENST00000413806 A0A0G2JRQ6 117 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 AHCTF1Q8WYP5 2266 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 TOMM40O96008 361 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 ETDBQ3ZM63 59 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 Q6ZWC4 215 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 GATD1Q8NB37 220 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 PLEKHB2Q96CS7 222 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 GLMPQ8WWB7 406 aa11.19□□□□□ -0.62
SMARCA4-202ENST00000413806 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 GAGE7O76087 117 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 GAGE12FP0CL80 117 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 GAGE12GP0CL81 117 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 GAGE12IP0CL82 117 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 GAGE4Q13068 117 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 C15orf32Q32M92 178 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 C10orf91Q5T1B1 145 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 C20orf204Q6ZNR8 217 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 ZNF138P52744 262 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 ZC2HC1BQ5TFG8 222 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 C5orf24Q7Z6I8 188 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 STHQ8IWL8 128 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 STPG4Q8N801 248 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 A0A0G2JNJ9 132 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 RNASE2P10153 161 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 GAGE5Q13069 117 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 GAGE6Q13070 117 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 Q9UFV3 132 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 B5MCH6 92 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 MORN3Q6PF18 240 aaPredicted RBP11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 EXOC3-AS1Q8N2X6 119 aa11.18□□□□□ -0.62
SMARCA4-202ENST00000413806 PLXNA4Q9HCM2 1894 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 A0A1W2PPM0 123 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 TRGV2A0A075B6R0 118 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 NPIPB5A8MRT5 1133 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 Q6ZRM9 215 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 C9orf139Q6ZV77 190 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 C3orf36Q3SXR2 165 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 FCN3O75636 299 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 Q6ZS92 163 aa11.17□□□□□ -0.62
SMARCA4-202ENST00000413806 CSTL1Q9H114 145 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 LMO1P25800 156 aa11.16□□□□□ -0.62
SMARCA4-202ENST00000413806 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms