RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ATXN8Q156A1 80 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 RPL39P5Q59GN2 51 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 Q6ZUT4 128 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 VKORC1L1Q8N0U8 176 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 DCTN5Q9BTE1 182 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 MSRB2Q9Y3D2 182 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 CREBBPQ92793 2442 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 NOTCH4Q99466 2003 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 Q6ZS92 163 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 ZCCHC24Q8N2G6 241 aaKnown RBP6.98□□□□□ -1.29
PBRM1-209ENST00000412587 IGKV1-9A0A0C4DH69 117 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 CRYGCP07315 174 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 CCL1P22362 96 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 ID1P41134 155 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 MBNL2Q5VZF2 373 aaKnown RBP6.98□□□□□ -1.29
PBRM1-209ENST00000412587 C15orf53Q8NAA6 179 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 ZNF114Q8NC26 417 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 LIME1Q9H400 295 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 HEATR1Q9H583 2144 aaKnown RBP6.98□□□□□ -1.29
PBRM1-209ENST00000412587 NXT2Q9NPJ8 142 aaKnown RBP6.98□□□□□ -1.29
PBRM1-209ENST00000412587 WNK2Q9Y3S1 2297 aa6.98□□□□□ -1.29
PBRM1-209ENST00000412587 K7ERJ3 54 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 HTN1P15515 57 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 SLC25A48Q6ZT89 311 aaKnown RBP6.97□□□□□ -1.29
PBRM1-209ENST00000412587 NEGR1Q7Z3B1 354 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 LYZL4Q96KX0 146 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 ZNF815PA8K554 130 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 CRYGSP22914 178 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 CENPVQ7Z7K6 275 aaPredicted RBP6.97□□□□□ -1.29
PBRM1-209ENST00000412587 VWC2Q2TAL6 325 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 C2orf82Q6UX34 121 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 METTL26Q96S19 204 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.97□□□□□ -1.296e-7■■■■■ 31.4
PBRM1-209ENST00000412587 SMIM27A0A1W2PRY6 76 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 IGLL5B9A064 214 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 NPIPB11E5RHQ5 1161 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 PLAUP00749 431 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 RRN3P1Q2M238 152 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 OSR1Q8TAX0 266 aaPredicted RBP6.97□□□□□ -1.29
PBRM1-209ENST00000412587 LSM4Q9Y4Z0 139 aaKnown RBP6.97□□□□□ -1.29
PBRM1-209ENST00000412587 LINC00312Q9Y6C7 94 aa6.97□□□□□ -1.29
PBRM1-209ENST00000412587 ABCA1O95477 2261 aa6.96□□□□□ -1.29
PBRM1-209ENST00000412587 YLPM1P49750 1951 aaKnown RBP6.96□□□□□ -1.29
PBRM1-209ENST00000412587 ZNF138P52744 262 aa6.96□□□□□ -1.29
PBRM1-209ENST00000412587 NABP1Q96AH0 204 aa6.96□□□□□ -1.29
PBRM1-209ENST00000412587 NDUFV3P56181 108 aaKnown RBP6.96□□□□□ -1.3
PBRM1-209ENST00000412587 C12orf74Q32Q52 190 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 COLCA1Q6ZS62 124 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 CUL9Q8IWT3 2517 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 DOCK7Q96N67 2140 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 LY6G6EA0A0G2JKS1 128 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 H3BMM0 161 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 M0QXV9 152 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 ZNF146Q15072 292 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 PAPPA-AS1Q5QFB9 102 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 PLA2G2CQ5R387 149 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 TEN1Q86WV5 123 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 UBE2WQ96B02 151 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 C7orf69Q9H7B7 122 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 U3KQA8 63 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 PAX9P55771 341 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 FAM106AQ4KMX7 169 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 FAM159AQ6UWV7 190 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 SPATA12Q7Z6I5 190 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 SPANXB1Q9NS25 103 aaPredicted RBP6.96□□□□□ -1.3
PBRM1-209ENST00000412587 TICRRQ7Z2Z1 1910 aa6.96□□□□□ -1.3
PBRM1-209ENST00000412587 FAM208BQ5VWN6 2430 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 HAX1O00165 279 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 CCL3L1P16619 93 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 GGTLC3B5MD39 225 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 NPIPB6E9PJ23 425 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 LYNX1G3V0Z9 82 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 LYNX1P0DP58 116 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 GNG5P63218 68 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 SPANXN1Q5VSR9 72 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 TREML4Q6UXN2 200 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 GOLT1AQ6ZVE7 132 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 WIPF2Q8TF74 440 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-209ENST00000412587 C20orf78Q9BR46 151 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 IGHG3P01860 377 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 PLNP26678 52 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 B3GALT5-AS1P59052 145 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 ODF1Q14990 250 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 NPIPB3Q92617 1050 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 C16orf92Q96LL3 132 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 SCGB3A1Q96QR1 104 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 PTPRDP23468 1912 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 FER1L5A0AVI2 2057 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 C17orf98A8MV24 154 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 CADP27708 2225 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 MRPL23Q16540 153 aaKnown RBP6.95□□□□□ -1.3
PBRM1-209ENST00000412587 DUX4L9Q6RFH8 374 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-209ENST00000412587 CIARTQ8N365 385 aaPredicted RBP6.95□□□□□ -1.3
PBRM1-209ENST00000412587 TNRC6AQ8NDV7 1962 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms