RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 NDUFA4O00483 81 aa8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 GGCTO75223 188 aaKnown RBP8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 SNAPINO95295 136 aa8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 GP9P14770 177 aa8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 C10orf99Q6UWK7 81 aa8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 FXYD5Q96DB9 178 aa8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 METTL26Q96S19 204 aa8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 NKX6-2Q9C056 277 aaPredicted RBP8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 FBN1P35555 2871 aaKnown RBP8.97□□□□□ -0.97
SNRNP35-202ENST00000412157 TRBV12-3P01733 135 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 RPLP1P05386 114 aaKnown RBP8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 NBEAP1P0C6P0 100 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 HIST1H1EP10412 219 aaKnown RBP8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 RPL7P18124 248 aaKnown RBP8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 FAM74A3Q4VXF1 159 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 FAM90A2PQ658T7 463 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 KLHDC1Q8N7A1 406 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 BLNKQ8WV28 456 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 OR5B12Q96R08 314 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 NIPSNAP3BQ9BS92 247 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 C20orf24Q9BUV8 137 aa8.96□□□□□ -0.98
SNRNP35-202ENST00000412157 SONP18583 2426 aaKnown RBP8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 IGHV3OR16-8A0A075B7F1 116 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 ZNF727A8MUV8 499 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 TCF21O43680 179 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 LGALS1P09382 135 aaKnown RBP8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 NPPCP23582 126 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 GUCA2BQ16661 112 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 ZNF674Q2M3X9 581 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 OR8I2Q8N0Y5 310 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 RNF152Q8N8N0 203 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 MYOZ3Q8TDC0 251 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 UBE2E2Q96LR5 201 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 GPR82Q96P67 336 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 SMIM7Q9BQ49 75 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 PARLQ9H300 379 aa8.95□□□□□ -0.98
SNRNP35-202ENST00000412157 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 M0R036 132 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 ATF4P18848 351 aaPredicted RBP8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 SUMO1P63165 101 aaKnown RBP8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 FAM106AQ4KMX7 169 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 KHDC1LQ5JSQ8 128 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 TMEM190Q8WZ59 177 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 TMEM158Q8WZ71 300 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 C11orf52Q96A22 123 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 TVP23CQ96ET8 276 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 ZNF414Q96IQ9 312 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 C16orf95Q9H693 158 aa8.94□□□□□ -0.98
SNRNP35-202ENST00000412157 GGTLC3B5MD39 225 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 H3BQ15 152 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 ZNF207O43670 478 aaKnown RBP8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 NDUFA7O95182 113 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 IGLC2P0DOY2 106 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 AKR1C3P42330 323 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 GALR1P47211 349 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 RANP62826 216 aaKnown RBP8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 PNRC1Q12796 327 aaPredicted RBP8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 RPEL1Q2QD12 228 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 C1orf194Q5T5A4 169 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 CLRN3Q8NCR9 226 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 GRAMD2BQ96HH9 432 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 TCEAL7Q9BRU2 100 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 Q9H3A6 140 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 ZNF586Q9NXT0 402 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 NAT8Q9UHE5 227 aa8.93□□□□□ -0.98
SNRNP35-202ENST00000412157 TRBV19A0A075B6N1 114 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 A0A1W2PS18 150 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 ZNF320A2RRD8 509 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 CLPSL1A2RUU4 121 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 PGPA6NDG6 321 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 H3BTX0 84 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 MRPS12O15235 138 aaKnown RBP8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 BUB3O43684 328 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 NDUFB4O95168 129 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 SLC25A5P05141 298 aaKnown RBP8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 SNRPCP09234 159 aaKnown RBP8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 CRYBB3P26998 211 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 BMI1P35226 326 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 PDE6HQ13956 83 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 AWAT1Q58HT5 328 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 LYPD1Q8N2G4 141 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 OTORQ9NRC9 128 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 UFC1Q9Y3C8 167 aa8.92□□□□□ -0.98
SNRNP35-202ENST00000412157 ANK3Q12955 4377 aaKnown RBP8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 IGHV4OR15-8A0A075B7B6 117 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 A0A087WW49 117 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 IGHV3-49A0A0A0MS15 119 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 ZNF785A8K8V0 405 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 PEX7O00628 323 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 CDX1P47902 265 aaPredicted RBP8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 CNN1P51911 297 aaKnown RBP8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 PSG9Q00887 426 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 RHEBQ15382 184 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 TMEM241Q24JQ0 296 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 UNQ9165/PRO28630Q6UXU0 137 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 GPHB5Q86YW7 130 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 C5orf17Q8NAS9 161 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 LINC01006Q8NI28 216 aa8.91□□□□□ -0.98
SNRNP35-202ENST00000412157 CMTM2Q8TAZ6 248 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms