RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 KIFC1Q9BW19 673 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 CCDC94Q9BW85 323 aaPredicted RBP-0.03□□□□□ -2.41
PMS1-203ENST00000409593 PARVGQ9HBI0 331 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 TNFSF18Q9UNG2 199 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 KIF1BO60333 1816 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 OTOGQ6ZRI0 2925 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 BCL9O00512 1426 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 FMN1Q68DA7 1419 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 ANK2Q01484 3957 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 A0A087WSZ3 146 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 TRGV10A0A0A0MS01 117 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 F8W1H4 67 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 J3QRK9 145 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 TMEM256-PLSCR3K7ERE1 68 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 CXCL8P10145 99 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 SRP14P37108 136 aaKnown RBP-0.04□□□□□ -2.42
PMS1-203ENST00000409593 CCL7P80098 99 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 C4orf22Q6V702 233 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 PSMF1Q92530 271 aa-0.04□□□□□ -2.42
PMS1-203ENST00000409593 POP5Q969H6 163 aaKnown RBP-0.04□□□□□ -2.42
PMS1-203ENST00000409593 SLC25A21Q9BQT8 299 aaPredicted RBP-0.04□□□□□ -2.42
PMS1-203ENST00000409593 KDM6AO15550 1401 aaPredicted RBP-0.04□□□□□ -2.42
PMS1-203ENST00000409593 COL24A1Q17RW2 1714 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 TRBV19A0A075B6N1 114 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 IGLV3-32A0A0A0MS00 114 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 SMIM23A6NLE4 172 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 TMEM114B3SHH9 223 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 ERC2-IT1O76042 136 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 OR7C1O76099 320 aaPredicted RBP-0.05□□□□□ -2.42
PMS1-203ENST00000409593 COX7CP15954 63 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 ERP29P30040 261 aaKnown RBP-0.05□□□□□ -2.42
PMS1-203ENST00000409593 CDKN2CP42773 168 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 KRTAP20-1Q3LI63 56 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 LYRM7Q5U5X0 104 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 C2orf82Q6UX34 121 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 TMEM14EPQ6UXP3 125 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 EXOC3-AS1Q8N2X6 119 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 SIGMAR1Q99720 223 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 WFDC10AQ9H1F0 79 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 FANCMQ8IYD8 2048 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 PPYP01298 95 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 C1QBP02746 253 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 CD14P08571 375 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 UBE2BP63146 152 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 CDK6Q00534 326 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 RGS21Q2M5E4 152 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 SPRR2GQ9BYE4 73 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 PBOV1Q9GZY1 135 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 SLC22A13Q9Y226 551 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 ASB4Q9Y574 426 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 LY96Q9Y6Y9 160 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 MIA2Q96PC5 1412 aa-0.05□□□□□ -2.42
PMS1-203ENST00000409593 RYR2Q92736 4967 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 MGAMO43451 1857 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 NUP98P52948 1817 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 CEP164Q9UPV0 1460 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 COL7A1Q02388 2944 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 PTPRFP10586 1907 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 JMJD7-PLA2G4BH0Y9G9 81 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 H3BRM9 83 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 CRHP06850 196 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 CST2P09228 141 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 HLA-EP13747 358 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 KDELR1P24390 212 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 DYNLT3P51808 116 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 CEBPGP53567 150 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 C6orf52Q5T4I8 152 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 ATOH7Q8N100 152 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 OR5AS1Q8N127 324 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 OR10AC1Q8NH08 325 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 GNPDA2Q8TDQ7 276 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 RAB37Q96AX2 223 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 MUCL1Q96DR8 90 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 YPEL2Q96QA6 119 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 NPCDR1Q9BY65 106 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 TMEM138Q9NPI0 162 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 FREM3P0C091 2139 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 CELSR1Q9NYQ6 3014 aa-0.06□□□□□ -2.42
PMS1-203ENST00000409593 HRNRQ86YZ3 2850 aaPredicted RBP-0.07□□□□□ -2.42
PMS1-203ENST00000409593 FRMPD1Q5SYB0 1578 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 SPTBN4Q9H254 2564 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 ERBINQ96RT1 1412 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 NUPR2A6NF83 97 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 M0R233 179 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 HMGB3O15347 200 aaKnown RBP-0.07□□□□□ -2.42
PMS1-203ENST00000409593 CTXN2P0C2S0 81 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 ZNF137PP52743 207 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 LIN52Q52LA3 116 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 BCL2L15Q5TBC7 163 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 GOLT1AQ6ZVE7 132 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 S100A7AQ86SG5 101 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 TEN1Q86WV5 123 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 PPTC7Q8NI37 304 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 CANT1Q8WVQ1 401 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 TEX37Q96LM6 180 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 NABP2Q9BQ15 211 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 IMUPQ9GZP8 106 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 TRPM1Q7Z4N2 1603 aa-0.07□□□□□ -2.42
PMS1-203ENST00000409593 MYO5AQ9Y4I1 1855 aaKnown RBP-0.07□□□□□ -2.42
PMS1-203ENST00000409593 TRAV23DV6A0A075B6W5 121 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms