RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RAB5CP51148 216 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 TAS2R45P59539 299 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 RAB2AP61019 212 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 EGFEM1PQ0D2K5 195 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 C16orf54Q6UWD8 224 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 FUT9Q9Y231 359 aa12.5□□□□□ -0.41
TSPAN4-208ENST00000409531 HELTA6NFD8 242 aa12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 EDN2P20800 178 aa12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 CDC34P49427 236 aaPredicted RBP12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 DPPA3Q6W0C5 159 aa12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 ADAMTSL5Q6ZMM2 481 aa12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 SCRT1Q9BWW7 348 aa12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 ACTR3CQ9C0K3 210 aaPredicted RBP12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 SEPSECSQ9HD40 501 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 RPRMQ9NS64 109 aa12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 ZMAT5Q9UDW3 170 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-208ENST00000409531 IGHV3-66A0A0C4DH42 116 aa12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 RPL7P18124 248 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 FAM122CQ6P4D5 195 aa12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 STXBP6Q8NFX7 210 aa12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 OR2K2Q8NGT1 345 aa12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 GLMPQ8WWB7 406 aa12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 AURKAIP1Q9NWT8 199 aaPredicted RBP12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 MLXQ9UH92 298 aa12.48□□□□□ -0.41
TSPAN4-208ENST00000409531 GALR1P47211 349 aa12.47□□□□□ -0.41
TSPAN4-208ENST00000409531 KRTAP10-11P60412 298 aa12.47□□□□□ -0.41
TSPAN4-208ENST00000409531 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
TSPAN4-208ENST00000409531 KHDC3LQ587J8 217 aa12.47□□□□□ -0.41
TSPAN4-208ENST00000409531 LEMD1Q68G75 181 aa12.47□□□□□ -0.41
TSPAN4-208ENST00000409531 SIGLEC15Q6ZMC9 328 aa12.47□□□□□ -0.41
TSPAN4-208ENST00000409531 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
TSPAN4-208ENST00000409531 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 CTXND1A0A1B0GTU2 59 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 IGLV1-51P01701 117 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 SULT1A2P50226 295 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 MORN5Q5VZ52 161 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 ALKAL2Q6UX46 152 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 MIR17HGQ75NE6 70 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 TCF24Q7RTU0 167 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 RAB24Q969Q5 203 aa12.46□□□□□ -0.41
TSPAN4-208ENST00000409531 IFNA7P01567 189 aa12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 RPL11P62913 178 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 PAFAH1B2P68402 229 aa12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 SPATA31B1PQ5VZV4 182 aa12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 PQLC2Q6ZP29 291 aa12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 TMEM14CQ9P0S9 112 aa12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 PRKDCP78527 4128 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-208ENST00000409531 TRAV5A0A0B4J249 113 aa12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 OR7C2O60412 319 aa12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 ATF4P18848 351 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 MEOX2P50222 304 aa12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 FAM90A2PQ658T7 463 aa12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 TEX261Q6UWH6 196 aa12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 FAM213BQ8TBF2 198 aa12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 SLC25A2Q9BXI2 301 aa12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 SORL1Q92673 2214 aa12.44□□□□□ -0.42
TSPAN4-208ENST00000409531 TSPAN4O14817 238 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 STAG3L2P0CL84 134 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 STAG3L3P0CL85 134 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 SAMD13Q5VXD3 122 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 TMEM61Q8N0U2 210 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 MRAPQ8TCY5 172 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 FAM167A-AS1Q96KT0 104 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 OR51M1Q9H341 326 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
TSPAN4-208ENST00000409531 ZNF785A8K8V0 405 aa12.42□□□□□ -0.42
TSPAN4-208ENST00000409531 CXorf1O96002 111 aa12.42□□□□□ -0.42
TSPAN4-208ENST00000409531 GP9P14770 177 aa12.42□□□□□ -0.42
TSPAN4-208ENST00000409531 GUK1Q16774 197 aa12.42□□□□□ -0.42
TSPAN4-208ENST00000409531 FAM74A1Q5RGS3 127 aa12.42□□□□□ -0.42
TSPAN4-208ENST00000409531 LRRC20Q8TCA0 184 aa12.42□□□□□ -0.42
TSPAN4-208ENST00000409531 SPAG8Q99932 426 aaPredicted RBP12.42□□□□□ -0.42
TSPAN4-208ENST00000409531 NRN1Q9NPD7 142 aa12.42□□□□□ -0.42
TSPAN4-208ENST00000409531 A0A087X0K7 114 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 TRAV2A0A0B4J234 112 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 MAP1LC3B2A6NCE7 125 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 TEX46H3BTG2 121 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 K7EIL1 84 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 DNASE2O00115 360 aaPredicted RBP12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 MRPS12O15235 138 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 H2AFB1P0C5Y9 115 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 HIST1H1EP10412 219 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 FHITP49789 147 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 ZNF726P1Q15940 193 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 ZNF680Q8NEM1 530 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 MAP1LC3BQ9GZQ8 125 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 HRH4Q9H3N8 390 aa12.41□□□□□ -0.42
TSPAN4-208ENST00000409531 IGKV3-7A0A075B6H7 116 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 OR4C46A6NHA9 309 aa12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 ZNF705EA8MWA4 302 aaPredicted RBP12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 HMGB3O15347 200 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-208ENST00000409531 ARL14EPLP0DKL9 152 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms