RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 D6R8Y8 96 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 NDUFS7O75251 213 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 FAM106CPP0CH98 169 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 CXCL12P48061 93 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 SUB1P53999 127 aaKnown RBP eCLIP4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 LOXL1Q08397 574 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 MLANAQ16655 118 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 RRN3P1Q2M238 152 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 C12orf74Q32Q52 190 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 FAM106AQ4KMX7 169 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 KLF17Q5JT82 389 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 FAM110AQ9BQ89 295 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 ZMAT4Q9H898 229 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 TET2Q6N021 2002 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 DIDO1Q9BTC0 2240 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 OVOL3O00110 214 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 PRDX2P32119 198 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 PAX8Q06710 450 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 ZNF562Q6V9R5 426 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 SRSF12Q8WXF0 261 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 RITA1Q96K30 269 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 OTORQ9NRC9 128 aa4.68□□□□□ -1.66
R3HDM1-202ENST00000409478 IGKCP01834 107 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 THBDP07204 575 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 INSL3P51460 131 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 SLC25A45Q8N413 288 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 DKK2Q9UBU2 259 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 MED12LQ86YW9 2145 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 IGHV5-10-1A0A0J9YXX1 117 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 MT-ATP8P03928 68 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 MPV17P39210 176 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 MZT1Q08AG7 82 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 ZCCHC24Q8N2G6 241 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 CIARTQ8N365 385 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 CD177Q8N6Q3 437 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 AKIRIN1Q9H9L7 192 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 CALYQ9NYX4 217 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 HCFC1P51610 2035 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 TFF1P04155 84 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 CFHR2P36980 270 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 TWIST1Q15672 202 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 ALKBH6Q3KRA9 238 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 FAM104BQ5XKR9 115 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 ZFAND6Q6FIF0 208 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 TMEM178AQ8NBL3 297 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 NPIPB3Q92617 1050 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 NDUFA4L2Q9NRX3 87 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 SPANXA1Q9NS26 97 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 B4GALT7Q9UBV7 327 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 HHLA3Q9XRX5 114 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 ESPL1Q14674 2120 aa4.67□□□□□ -1.66
R3HDM1-202ENST00000409478 WI2-2373I1.2A0A1W2PRP0 233 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 GP9P14770 177 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 AMTNQ6UX39 209 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 C1orf229Q6ZS94 237 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 PRNTQ86SH4 94 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 SSUH2Q9Y2M2 353 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 IGKV1D-37A0A075B6S9 117 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 IGKV2D-26A0A0A0MRZ7 120 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 LINC01619G3V211 115 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 ATP5LO75964 103 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 PLAUP00749 431 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 HOXB4P17483 251 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 ORM2P19652 201 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 IL11RAQ14626 422 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 ODF1Q14990 250 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 CFAP126Q5VTH2 177 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 TEX29Q8N6K0 151 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 TMEM75Q8N9X5 138 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 KLF14Q8TD94 323 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 DLX4Q92988 240 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 CDH23Q9H251 3354 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 TRBV7-9A0A0J9YWB2 115 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 TMEM262E9PQX1 116 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 DPM2O94777 84 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 IGHV3-13P01766 116 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 XGP55808 180 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 LYRM7Q5U5X0 104 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 PPDPFLQ8WWR9 84 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 LINC01546A6NGU7 62 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 SAA1P0DJI8 122 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 FOLR3P41439 243 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 OSR1Q8TAX0 266 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 FLYWCH2Q96CP2 140 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 HIST1H4GQ99525 98 aa4.66□□□□□ -1.66
R3HDM1-202ENST00000409478 IGLV2-11P01706 119 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 GATA3P23771 443 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 C3AR1Q16581 482 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 TMEM30BQ3MIR4 351 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 SHISA2Q6UWI4 295 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 OR10X1Q8NGY0 326 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 RAX2Q96IS3 184 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 TRGV9Q99603 122 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 TPPP3Q9BW30 176 aa4.65□□□□□ -1.66
R3HDM1-202ENST00000409478 GOLT1AQ6ZVE7 132 aa4.65□□□□□ -1.67
R3HDM1-202ENST00000409478 TMEM158Q8WZ71 300 aa4.65□□□□□ -1.67
R3HDM1-202ENST00000409478 SLC25A39Q9BZJ4 359 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-202ENST00000409478 FSCN3Q9NQT6 498 aa4.65□□□□□ -1.67
R3HDM1-202ENST00000409478 A0A1W2PQM1 296 aa4.65□□□□□ -1.67
R3HDM1-202ENST00000409478 PINLYPA6NC86 204 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms