RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 MORN5Q5VZ52 161 aa15.48■□□□□ 0.07
VSX1-203ENST00000409285 SAP30O75446 220 aa15.47■□□□□ 0.07
VSX1-203ENST00000409285 IGLV1-51P01701 117 aa15.47■□□□□ 0.07
VSX1-203ENST00000409285 CDC34P49427 236 aaPredicted RBP15.47■□□□□ 0.07
VSX1-203ENST00000409285 SULT1A2P50226 295 aa15.47■□□□□ 0.07
VSX1-203ENST00000409285 SORL1Q92673 2214 aa15.47■□□□□ 0.07
VSX1-203ENST00000409285 MGAM2Q2M2H8 2515 aa15.47■□□□□ 0.07
VSX1-203ENST00000409285 IGHV3OR16-13A0A075B7E8 117 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 IGHV3-74A0A0B4J1X5 117 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 RPL7P18124 248 aaKnown RBP15.46■□□□□ 0.07
VSX1-203ENST00000409285 DEFB114Q30KQ6 69 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 FAM90A2PQ658T7 463 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 OR8I2Q8N0Y5 310 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 OR2K2Q8NGT1 345 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 DYNLRB2Q8TF09 96 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 FAM167A-AS1Q96KT0 104 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 GPR61Q9BZJ8 451 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 UBQLN2Q9UHD9 624 aa15.46■□□□□ 0.07
VSX1-203ENST00000409285 A0A1W2PPV4 95 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 HELTA6NFD8 242 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 TAS2R45P59539 299 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 FAM74A1Q5RGS3 127 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 SPATA31B1PQ5VZV4 182 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 LEMD1Q68G75 181 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 FAM122CQ6P4D5 195 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 ZNF767PQ75MW2 155 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 MIR17HGQ75NE6 70 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 BPIFA4PQ86YQ2 179 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 STXBP6Q8NFX7 210 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 SLC25A2Q9BXI2 301 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 ACTR3CQ9C0K3 210 aaPredicted RBP15.46■□□□□ 0.06
VSX1-203ENST00000409285 SLC25A22Q9H936 323 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 TMEM14CQ9P0S9 112 aa15.46■□□□□ 0.06
VSX1-203ENST00000409285 TRAV25A0A0B4J276 109 aa15.45■□□□□ 0.06
VSX1-203ENST00000409285 IGHV3-66A0A0C4DH42 116 aa15.45■□□□□ 0.06
VSX1-203ENST00000409285 CTXND1A0A1B0GTU2 59 aa15.45■□□□□ 0.06
VSX1-203ENST00000409285 MRPS12O15235 138 aaKnown RBP15.45■□□□□ 0.06
VSX1-203ENST00000409285 KHDC3LQ587J8 217 aa15.45■□□□□ 0.06
VSX1-203ENST00000409285 SIGLEC15Q6ZMC9 328 aa15.45■□□□□ 0.06
VSX1-203ENST00000409285 RAB24Q969Q5 203 aa15.45■□□□□ 0.06
VSX1-203ENST00000409285 NBEAL1Q6ZS30 2694 aa15.45■□□□□ 0.06
VSX1-203ENST00000409285 RGS13O14921 159 aa15.44■□□□□ 0.06
VSX1-203ENST00000409285 STAG3L2P0CL84 134 aa15.44■□□□□ 0.06
VSX1-203ENST00000409285 STAG3L3P0CL85 134 aa15.44■□□□□ 0.06
VSX1-203ENST00000409285 GP9P14770 177 aa15.44■□□□□ 0.06
VSX1-203ENST00000409285 ZNF726P1Q15940 193 aa15.44■□□□□ 0.06
VSX1-203ENST00000409285 TRAV5A0A0B4J249 113 aa15.43■□□□□ 0.06
VSX1-203ENST00000409285 GALR1P47211 349 aa15.43■□□□□ 0.06
VSX1-203ENST00000409285 PQLC2Q6ZP29 291 aa15.43■□□□□ 0.06
VSX1-203ENST00000409285 TCF24Q7RTU0 167 aa15.43■□□□□ 0.06
VSX1-203ENST00000409285 RNF141Q8WVD5 230 aa15.43■□□□□ 0.06
VSX1-203ENST00000409285 A0A087X0K7 114 aa15.42■□□□□ 0.06
VSX1-203ENST00000409285 TSPAN4O14817 238 aa15.42■□□□□ 0.06
VSX1-203ENST00000409285 IGLC2P0DOY2 106 aa15.42■□□□□ 0.06
VSX1-203ENST00000409285 FHITP49789 147 aa15.42■□□□□ 0.06
VSX1-203ENST00000409285 MEOX2P50222 304 aa15.42■□□□□ 0.06
VSX1-203ENST00000409285 CD300EQ496F6 205 aaPredicted RBP15.42■□□□□ 0.06
VSX1-203ENST00000409285 SSX7Q7RTT5 188 aa15.42■□□□□ 0.06
VSX1-203ENST00000409285 TMEM61Q8N0U2 210 aa15.42■□□□□ 0.06
VSX1-203ENST00000409285 IGLL1P15814 213 aa15.41■□□□□ 0.06
VSX1-203ENST00000409285 FAM213BQ8TBF2 198 aa15.41■□□□□ 0.06
VSX1-203ENST00000409285 HRH4Q9H3N8 390 aa15.41■□□□□ 0.06
VSX1-203ENST00000409285 TRAV2A0A0B4J234 112 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 LCN12Q6JVE5 192 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 MBD3L1Q8WWY6 194 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 ZNF503Q96F45 646 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 NRN1Q9NPD7 142 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 SMAD5-AS1Q9Y6J3 95 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 OR7C2O60412 319 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 CXorf1O96002 111 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 SAMD13Q5VXD3 122 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 RBPMS2Q6ZRY4 209 aaKnown RBP15.4■□□□□ 0.06
VSX1-203ENST00000409285 LRRC20Q8TCA0 184 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 C17orf77Q96MU5 243 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 SPAG8Q99932 426 aaPredicted RBP15.4■□□□□ 0.06
VSX1-203ENST00000409285 OR51M1Q9H341 326 aa15.4■□□□□ 0.06
VSX1-203ENST00000409285 MAP1LC3B2A6NCE7 125 aa15.39■□□□□ 0.05
VSX1-203ENST00000409285 ARL14EPLP0DKL9 152 aa15.39■□□□□ 0.05
VSX1-203ENST00000409285 ATF4P18848 351 aaPredicted RBP15.39■□□□□ 0.05
VSX1-203ENST00000409285 GUK1Q16774 197 aa15.39■□□□□ 0.05
VSX1-203ENST00000409285 FXYD5Q96DB9 178 aa15.39■□□□□ 0.05
VSX1-203ENST00000409285 SAT2Q96F10 170 aaPredicted RBP15.39■□□□□ 0.05
VSX1-203ENST00000409285 PAXXQ9BUH6 204 aa15.39■□□□□ 0.05
VSX1-203ENST00000409285 MAP1LC3BQ9GZQ8 125 aa15.39■□□□□ 0.05
VSX1-203ENST00000409285 TRAV1-1A0A0B4J248 108 aa15.38■□□□□ 0.05
VSX1-203ENST00000409285 PYYP10082 97 aa15.38■□□□□ 0.05
VSX1-203ENST00000409285 HIST1H1EP10412 219 aaKnown RBP15.38■□□□□ 0.05
VSX1-203ENST00000409285 RAB14P61106 215 aa15.38■□□□□ 0.05
VSX1-203ENST00000409285 PDE6HQ13956 83 aa15.38■□□□□ 0.05
VSX1-203ENST00000409285 SUN5Q8TC36 379 aa15.38■□□□□ 0.05
VSX1-203ENST00000409285 DCANP1Q8TF63 244 aa15.38■□□□□ 0.05
VSX1-203ENST00000409285 MS4A6AQ9H2W1 248 aa15.38■□□□□ 0.05
VSX1-203ENST00000409285 DNAH3Q8TD57 4116 aa15.38■□□□□ 0.05
VSX1-203ENST00000409285 NOTCH1P46531 2555 aa15.37■□□□□ 0.05
VSX1-203ENST00000409285 IZUMO1RA6ND01 250 aa15.37■□□□□ 0.05
VSX1-203ENST00000409285 ZNF705EA8MWA4 302 aaPredicted RBP15.37■□□□□ 0.05
VSX1-203ENST00000409285 HMGB3O15347 200 aaKnown RBP15.37■□□□□ 0.05
VSX1-203ENST00000409285 ZNF253O75346 499 aa15.37■□□□□ 0.05
VSX1-203ENST00000409285 H2AFB1P0C5Y9 115 aa15.37■□□□□ 0.05
VSX1-203ENST00000409285 RPL11P62913 178 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms