RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 CDKN1BP46527 198 aa11.53□□□□□ -0.56
AFF3-202ENST00000409236 Q6ZT83 130 aa11.53□□□□□ -0.56
AFF3-202ENST00000409236 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
AFF3-202ENST00000409236 YPEL1O60688 119 aa11.52□□□□□ -0.56
AFF3-202ENST00000409236 LYPD1Q8N2G4 141 aa11.52□□□□□ -0.56
AFF3-202ENST00000409236 YPEL2Q96QA6 119 aa11.52□□□□□ -0.56
AFF3-202ENST00000409236 ADAMTSL1Q8N6G6 1762 aa11.52□□□□□ -0.56
AFF3-202ENST00000409236 A0A0J9YW62 118 aa11.52□□□□□ -0.56
AFF3-202ENST00000409236 CXCL1P09341 107 aa11.52□□□□□ -0.56
AFF3-202ENST00000409236 STPG4Q8N801 248 aa11.52□□□□□ -0.56
AFF3-202ENST00000409236 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.56
AFF3-202ENST00000409236 RAMP3O60896 148 aa11.52□□□□□ -0.57
AFF3-202ENST00000409236 ZC2HC1BQ5TFG8 222 aa11.52□□□□□ -0.57
AFF3-202ENST00000409236 APOBEC3AP31941 199 aaPredicted RBP11.52□□□□□ -0.57
AFF3-202ENST00000409236 IGKV1D-16P01601 117 aa11.52□□□□□ -0.57
AFF3-202ENST00000409236 PAX8Q06710 450 aa11.52□□□□□ -0.57
AFF3-202ENST00000409236 DMRTC2Q8IXT2 367 aaPredicted RBP11.52□□□□□ -0.57
AFF3-202ENST00000409236 CARD19Q96LW7 228 aa11.52□□□□□ -0.57
AFF3-202ENST00000409236 SPXQ9BT56 116 aa11.52□□□□□ -0.57
AFF3-202ENST00000409236 SCRT1Q9BWW7 348 aa11.52□□□□□ -0.57
AFF3-202ENST00000409236 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 LINC01551Q86U37 167 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 C1orf159Q96HA4 380 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 IGHV1OR15-9A0A0B4J2B8 117 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 NEU4Q8WWR8 484 aaPredicted RBP11.51□□□□□ -0.57
AFF3-202ENST00000409236 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 SRSF3P84103 164 aaKnown RBP11.51□□□□□ -0.57
AFF3-202ENST00000409236 LINC00477Q96M19 166 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 FGF6P10767 208 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 ZNF561-AS1K7EIQ3 104 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 CEND1Q8N111 149 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 TRGV9Q99603 122 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 FUSP35637 526 aaKnown RBP eCLIP11.51□□□□□ -0.57
AFF3-202ENST00000409236 TRBV7-1A0A0A6YYK4 115 aa11.51□□□□□ -0.57
AFF3-202ENST00000409236 ZNF138P52744 262 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 SPSB3Q6PJ21 355 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 GREM1O60565 184 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 BVES-AS1Q5T3Y7 98 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 SPATA31B1PQ5VZV4 182 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 IL17RELQ6ZVW7 336 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 TRPT1Q86TN4 253 aaKnown RBP11.5□□□□□ -0.57
AFF3-202ENST00000409236 ZNF876PQ49A33 203 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 ZNF497Q6ZNH5 498 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 TAL2Q16559 108 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 SRSF7Q16629 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
AFF3-202ENST00000409236 TMEM240Q5SV17 173 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 TRAV25A0A0B4J276 109 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 FBLN5Q9UBX5 448 aa11.5□□□□□ -0.57
AFF3-202ENST00000409236 TRGV1A0A0A0MS02 117 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 B5MCH6 92 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 CXCL10P02778 98 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 FAM168AQ92567 244 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 LYZL1Q6UWQ5 148 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 ZNF664Q8N3J9 261 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 CISD3P0C7P0 127 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 TRAV12-1A0A0B4J245 112 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 SRSF2Q01130 221 aaKnown RBP11.49□□□□□ -0.57
AFF3-202ENST00000409236 SPANXB1Q9NS25 103 aaPredicted RBP11.49□□□□□ -0.57
AFF3-202ENST00000409236 SHANK3Q9BYB0 1731 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 PYYP10082 97 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 RNF126Q9BV68 326 aa11.49□□□□□ -0.57
AFF3-202ENST00000409236 SRRM4A7MD48 611 aaKnown RBP11.48□□□□□ -0.57
AFF3-202ENST00000409236 LINC00271P0C7V0 271 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 TRBV6-7A0A0A0MS04 114 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 CRYBA4P53673 196 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 LCN12Q6JVE5 192 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 S4R3C0 116 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 LIMS2Q7Z4I7 341 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 DTX4Q9Y2E6 619 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 TAX1BP3O14907 124 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 MORN5Q5VZ52 161 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 ZNF474Q6S9Z5 364 aaPredicted RBP11.48□□□□□ -0.57
AFF3-202ENST00000409236 SIVA1O15304 175 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 Q0VG73 95 aa11.48□□□□□ -0.57
AFF3-202ENST00000409236 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.47□□□□□ -0.57
AFF3-202ENST00000409236 BRK1Q8WUW1 75 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 ORMDL1Q9P0S3 153 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 A0A1W2PR77 199 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 ETDBQ3ZM63 59 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 CSPG4Q6UVK1 2322 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 CELA2BP08218 269 aaPredicted RBP11.47□□□□□ -0.57
AFF3-202ENST00000409236 ATP5G1P05496 136 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 DEPPQ9NTK1 212 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 ZNF319Q9P2F9 582 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 LCNL1Q6ZST4 164 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 PRSS22Q9GZN4 317 aa11.47□□□□□ -0.57
AFF3-202ENST00000409236 RHODO00212 210 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 COLCA1Q6ZS62 124 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 I3L3M4 83 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 SH2D1AO60880 128 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 COX8AP10176 69 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 CFPP27918 469 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 GLRX5Q86SX6 157 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 TMEM75Q8N9X5 138 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 WNT2P09544 360 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 C1QTNF5Q9BXJ0 243 aa11.46□□□□□ -0.57
AFF3-202ENST00000409236 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.58
AFF3-202ENST00000409236 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms