RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TRBV20-1A0A075B6N2 111 aa14.43□□□□□ -0.1
SMPD4-202ENST00000409031 KLF5Q13887 457 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-202ENST00000409031 RNF182Q8N6D2 247 aa14.43□□□□□ -0.1
SMPD4-202ENST00000409031 PF4V1P10720 104 aa14.42□□□□□ -0.1
SMPD4-202ENST00000409031 IGKV3-15P01624 115 aa14.42□□□□□ -0.1
SMPD4-202ENST00000409031 KLF12Q9Y4X4 402 aa14.42□□□□□ -0.1
SMPD4-202ENST00000409031 CACNA1EQ15878 2313 aa14.42□□□□□ -0.1
SMPD4-202ENST00000409031 VWA8A3KMH1 1905 aa14.42□□□□□ -0.1
SMPD4-202ENST00000409031 VWC2Q2TAL6 325 aa14.42□□□□□ -0.1
SMPD4-202ENST00000409031 PI4KAP42356 2102 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 CD177Q8N6Q3 437 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 K7EN84 100 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 IGHV3-23P01764 117 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 MYOD1P15172 320 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 FAM106AQ4KMX7 169 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 SH2D1AO60880 128 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 IGHV3-49A0A0A0MS15 119 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 TRAV21A0A0B4J279 112 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 MLANAQ16655 118 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 TRIOBPQ9H2D6 2365 aa14.41□□□□□ -0.1
SMPD4-202ENST00000409031 SPTBN1Q01082 2364 aaKnown RBP14.4□□□□□ -0.1
SMPD4-202ENST00000409031 HAX1O00165 279 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 FAM104BQ5XKR9 115 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 LHFPL4Q7Z7J7 247 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 METRNQ9UJH8 293 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 TNFRSF18Q9Y5U5 241 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 DDB2Q92466 427 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 TMEM14BQ9NUH8 114 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 SRSF6Q13247 344 aaKnown RBP14.4□□□□□ -0.1
SMPD4-202ENST00000409031 C2orf82Q6UX34 121 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 TMEM133Q9H2Q1 129 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 ROS1P08922 2347 aa14.4□□□□□ -0.1
SMPD4-202ENST00000409031 NBR2O15453 112 aa14.4□□□□□ -0.11
SMPD4-202ENST00000409031 RSPO1Q2MKA7 263 aaPredicted RBP14.4□□□□□ -0.11
SMPD4-202ENST00000409031 DEFB124Q8NES8 71 aa14.4□□□□□ -0.11
SMPD4-202ENST00000409031 IGHV3-66A0A0C4DH42 116 aa14.39□□□□□ -0.11
SMPD4-202ENST00000409031 TAL2Q16559 108 aa14.39□□□□□ -0.11
SMPD4-202ENST00000409031 TRAV40A0A0B4J280 105 aa14.39□□□□□ -0.11
SMPD4-202ENST00000409031 WISP1O95388 367 aa14.39□□□□□ -0.11
SMPD4-202ENST00000409031 IGHV3OR16-8A0A075B7F1 116 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 UBE2L6O14933 153 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 IGKV2-40A0A087WW87 121 aaPredicted RBP14.38□□□□□ -0.11
SMPD4-202ENST00000409031 NPFFO15130 113 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 IGKV2D-40P01614 121 aaPredicted RBP14.38□□□□□ -0.11
SMPD4-202ENST00000409031 LMO1P25800 156 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 C17orf100A8MU93 164 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 C9JAW5 83 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 M0R2P5 195 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 TMEM8BA6NDV4 472 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 SMKR1H3BMG3 65 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 NKX2-8O15522 239 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 CFHR2P36980 270 aa14.38□□□□□ -0.11
SMPD4-202ENST00000409031 ABCA1O95477 2261 aa14.37□□□□□ -0.11
SMPD4-202ENST00000409031 OR13C6PQ8NH95 151 aa14.37□□□□□ -0.11
SMPD4-202ENST00000409031 B9A039 149 aa14.37□□□□□ -0.11
SMPD4-202ENST00000409031 SSC4DQ8WTU2 575 aa14.37□□□□□ -0.11
SMPD4-202ENST00000409031 PLEKHB2Q96CS7 222 aa14.37□□□□□ -0.11
SMPD4-202ENST00000409031 SAP30O75446 220 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 TNFRSF6BO95407 300 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 SNRPD3P62318 126 aaKnown RBP14.36□□□□□ -0.11
SMPD4-202ENST00000409031 Q8NFD4 153 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 PLXND1Q9Y4D7 1925 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 PINLYPA6NC86 204 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 H3BMG7 143 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 PLXNA4Q9HCM2 1894 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 PRSS57Q6UWY2 283 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 TRAV12-3A0A0B4J271 114 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 ZNF747Q9BV97 191 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 PLSCR4Q9NRQ2 329 aa14.36□□□□□ -0.11
SMPD4-202ENST00000409031 MOB4Q9Y3A3 225 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 H0YJW9 148 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 RNASE1P07998 156 aaKnown RBP14.35□□□□□ -0.11
SMPD4-202ENST00000409031 CD24P25063 80 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 PRR20EP86478 221 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 PRR20CP86479 221 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 PRR20DP86480 221 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 PRR20BP86481 221 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 PRR20AP86496 221 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 ZCCHC24Q8N2G6 241 aaKnown RBP14.35□□□□□ -0.11
SMPD4-202ENST00000409031 PRSS46E5RG02 174 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 RNASE4P34096 147 aaKnown RBP14.35□□□□□ -0.11
SMPD4-202ENST00000409031 B3GALT5-AS1P59052 145 aa14.35□□□□□ -0.11
SMPD4-202ENST00000409031 TCF20Q9UGU0 1960 aaKnown RBP14.34□□□□□ -0.11
SMPD4-202ENST00000409031 TEX48A0A1B0GUV7 120 aa14.34□□□□□ -0.11
SMPD4-202ENST00000409031 TAX1BP3O14907 124 aa14.34□□□□□ -0.11
SMPD4-202ENST00000409031 PDE6HQ13956 83 aa14.34□□□□□ -0.11
SMPD4-202ENST00000409031 WNT2P09544 360 aa14.34□□□□□ -0.11
SMPD4-202ENST00000409031 IGLC1P0CG04 106 aa14.34□□□□□ -0.11
SMPD4-202ENST00000409031 CEND1Q8N111 149 aa14.34□□□□□ -0.11
SMPD4-202ENST00000409031 ZNF71Q9NQZ8 489 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-202ENST00000409031 EPOPA6NHQ4 379 aa14.33□□□□□ -0.11
SMPD4-202ENST00000409031 TMEM75Q8N9X5 138 aa14.33□□□□□ -0.11
SMPD4-202ENST00000409031 C9orf106Q8NAJ2 232 aa14.33□□□□□ -0.11
SMPD4-202ENST00000409031 IGHV1-18A0A0C4DH31 117 aa14.33□□□□□ -0.12
SMPD4-202ENST00000409031 TRBV7-9A0A0J9YWB2 115 aa14.33□□□□□ -0.12
SMPD4-202ENST00000409031 TMEM213A2RRL7 107 aa14.33□□□□□ -0.12
SMPD4-202ENST00000409031 CNTFRP26992 372 aa14.33□□□□□ -0.12
SMPD4-202ENST00000409031 CLEC19AQ6UXS0 136 aa14.33□□□□□ -0.12
SMPD4-202ENST00000409031 DYNLRB2Q8TF09 96 aa14.33□□□□□ -0.12
SMPD4-202ENST00000409031 TMEM101Q96IK0 257 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms