RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 K7EN84 100 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 MGST1P10620 155 aaKnown RBP10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 FABP4P15090 132 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 CNTFRP26992 372 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 BRS3P32247 399 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 EBI3Q14213 229 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 HES1Q14469 280 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 FXYD3Q14802 87 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 TMEM183BQ1AE95 376 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 C5orf64Q2M2E5 130 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 ZNF562Q6V9R5 426 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 VMO1Q7Z5L0 202 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 ZNF329Q86UD4 541 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 TEX29Q8N6K0 151 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 C5orf17Q8NAS9 161 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 CFHR4Q92496 578 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 FXYD5Q96DB9 178 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 FMC1Q96HJ9 113 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 ZNF48Q96MX3 618 aaPredicted RBP10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 SIRPDQ9H106 197 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 AURKAIP1Q9NWT8 199 aaPredicted RBP10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 EPDR1Q9UM22 224 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 V9GYV3 84 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 VWFP04275 2813 aa10.17□□□□□ -0.78
SMARCB1-203ENST00000407082 TRAV5A0A0B4J249 113 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 NPIPB5A8MRT5 1133 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 I3L2K1 104 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 GATCO43716 136 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 SLC25A5P05141 298 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 RD3LP0DJH9 198 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 HIST1H1BP16401 226 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 MFAP4P55083 255 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 BAGE2Q86Y30 109 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 LYPD1Q8N2G4 141 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 OR5R1Q8NH85 324 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 GRAMD2BQ96HH9 432 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 IGF2BP2-AS1Q96M15 143 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 DUX5Q96PT3 197 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 TBX15Q96SF7 602 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 GSN-AS1Q9NRJ2 163 aa10.16□□□□□ -0.78
SMARCB1-203ENST00000407082 PGPA6NDG6 321 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 ZNF705GA8MUZ8 300 aaPredicted RBP10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 K7EQM0 130 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 TOMM40O96008 361 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 IGLC1P0CG04 106 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 FAM106CPP0CH98 169 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 MFAP2P55001 183 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 DLX1P56177 255 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 PAFAH1B2P68402 229 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 CX3CL1P78423 397 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 SSBP2P81877 361 aaPredicted RBP10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 PRB3Q04118 309 aaPredicted RBP10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 HIST1H2BLQ99880 126 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 ATG101Q9BSB4 218 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 OTORQ9NRC9 128 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 SERTAD4Q9NUC0 356 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 HILPDAQ9Y5L2 63 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 NBEAL2Q6ZNJ1 2754 aa10.15□□□□□ -0.78
SMARCB1-203ENST00000407082 IGHV3OR16-10A0A075B7F0 116 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 SMIM27A0A1W2PRY6 76 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 IZUMO1RA6ND01 250 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 IFITM10A6NMD0 228 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 FCN1O00602 326 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 HLA-DQA1P01909 254 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 PYYP10082 97 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 MYCNOSP40205 109 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 UBE2E1P51965 193 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 LYZP61626 148 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 RANP62826 216 aaKnown RBP10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 JOSD1Q15040 202 aaPredicted RBP10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 BPIFA4PQ86YQ2 179 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 TTC9CQ8N5M4 171 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 OR4F17Q8NGA8 305 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 CMTM2Q8TAZ6 248 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 TXN2Q99757 166 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 MRPL18Q9H0U6 180 aaKnown RBP10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 ZNF331Q9NQX6 463 aaPredicted RBP10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 KLF12Q9Y4X4 402 aa10.14□□□□□ -0.79
SMARCB1-203ENST00000407082 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 TRBV6-1A0A0K0K1D8 114 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 CENPVL3A0A0U1RRI6 287 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 SLC17A3O00476 420 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 AMY1AP04745 511 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 IGHV4-38-2P0DP08 117 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 PSG1P11464 419 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 CRISP2P16562 243 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 TMEM11P17152 192 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 KLRD1Q13241 179 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 USF2Q15853 346 aaPredicted RBP10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 PDZD11Q5EBL8 140 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 PYY3Q5JQD4 70 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 KLF17Q5JT82 389 aaPredicted RBP10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 ARPC1AQ92747 370 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 DAZAP1Q96EP5 407 aaKnown RBP10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 GPR82Q96P67 336 aa10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 MRPL36Q9P0J6 103 aaKnown RBP10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 MRPL27Q9P0M9 148 aaKnown RBP10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 SOX21Q9Y651 276 aaPredicted RBP10.13□□□□□ -0.79
SMARCB1-203ENST00000407082 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms