RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 LHFPL4Q7Z7J7 247 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 SSC4DQ8WTU2 575 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 Q9H3A6 140 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 FBXL15Q9H469 300 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 IGHV3OR15-7A0A075B7D8 119 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 TRBV7-9A0A0J9YWB2 115 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 SYNGR3O43761 229 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 WNT2P09544 360 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 VDAC2P45880 294 aaPredicted RBP4.81□□□□□ -1.64
HDAC9-203ENST00000406072 RNF166Q96A37 237 aaPredicted RBP4.81□□□□□ -1.64
HDAC9-203ENST00000406072 FER1L6-AS2Q96M78 137 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 PRDM14Q9GZV8 571 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 IDI2-AS1Q9NZ38 188 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 MED13LQ71F56 2210 aa4.81□□□□□ -1.64
HDAC9-203ENST00000406072 TRAV12-3A0A0B4J271 114 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 TMEM8BA6NDV4 472 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 LINC01549A6NIU2 74 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 CGB1A6NKQ9 187 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 C15orf62A8K5M9 175 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 K7EN84 100 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 LGALS7P47929 136 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 PCP2Q8IVA1 136 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 WDR31Q8NA23 367 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 NXT2Q9NPJ8 142 aaKnown RBP4.8□□□□□ -1.64
HDAC9-203ENST00000406072 SMPXQ9UHP9 88 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 SZT2Q5T011 3432 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 KLRC4-KLRK1H3BQV0 150 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 MGST3O14880 152 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 LIFP15018 202 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 SPATA12Q7Z6I5 190 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 RAX2Q96IS3 184 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 DCTN5Q9BTE1 182 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 XIRP2A4UGR9 3374 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 SPAARA0A1B0GVQ0 90 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 FCN3O75636 299 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF688P0C7X2 276 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 TCTEX1D4Q5JR98 221 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 DGAT2L7PQ6IED9 249 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 CIARTQ8N365 385 aaPredicted RBP4.8□□□□□ -1.64
HDAC9-203ENST00000406072 C20orf78Q9BR46 151 aa4.8□□□□□ -1.64
HDAC9-203ENST00000406072 WNT9BO14905 357 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 CTRLP40313 264 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 DLX6P56179 175 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 C2orf82Q6UX34 121 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 FOXI2Q6ZQN5 318 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 MOGAT3Q86VF5 341 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 SCRT2Q9NQ03 307 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 SMIM27A0A1W2PRY6 76 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 CRXO43186 299 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-203ENST00000406072 RPL27AP46776 148 aaKnown RBP4.79□□□□□ -1.64
HDAC9-203ENST00000406072 ATP5IP56385 69 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-203ENST00000406072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 MDP1Q86V88 176 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 FAM168AQ92567 244 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 IGHV3-72A0A0B4J1Y9 119 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 TRAV40A0A0B4J280 105 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 A4D1N5 150 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 NPIPB6E9PJ23 425 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 K7EMI3 77 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 LINC00205P59089 165 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 C12orf74Q32Q52 190 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 CACNG8Q8WXS5 425 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 TMEM101Q96IK0 257 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 C1RLQ9NZP8 487 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 MED13Q9UHV7 2174 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 DSCAML1Q8TD84 2053 aa4.79□□□□□ -1.64
HDAC9-203ENST00000406072 IGKV1-6A0A0C4DH72 117 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 M0R1B8 84 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 SIVA1O15304 175 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 TNFRSF1AP19438 455 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 MED12LQ86YW9 2145 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 AMN1Q8IY45 258 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 OR13A1Q8NGR1 328 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 TMEM54Q969K7 222 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 CALYQ9NYX4 217 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 CHCHD2Q9Y6H1 151 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-203ENST00000406072 FAM90A27PA6NNH2 459 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 E9PLN8 166 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 SMKR1H3BMG3 65 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 PAX1P15863 534 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 MFAP4P55083 255 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 LGALS9BQ3B8N2 356 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 LGALS9CQ6DKI2 356 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 CEND1Q8N111 149 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 ZNF747Q9BV97 191 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 JPT1Q9UK76 154 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 EML6Q6ZMW3 1958 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 IGLL5B9A064 214 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 NDUFB3O43676 98 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 IGKV1-39P01597 117 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 IGKV1D-39P04432 117 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 ARMS2P0C7Q2 107 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 FXYD2P54710 66 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 PSG7Q13046 419 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 MRPL23Q16540 153 aaKnown RBP4.78□□□□□ -1.64
HDAC9-203ENST00000406072 C15orf53Q8NAA6 179 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 NUP37Q8NFH4 326 aa4.78□□□□□ -1.64
HDAC9-203ENST00000406072 PLXNB1O43157 2135 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms