RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 LOXL1Q08397 574 aaPredicted RBP11.38□□□□□ -0.59
DUSP28-202ENST00000405954 ZNF766Q5HY98 468 aa11.38□□□□□ -0.59
DUSP28-202ENST00000405954 BDP1A6H8Y1 2624 aa11.38□□□□□ -0.59
DUSP28-202ENST00000405954 ATMQ13315 3056 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 NPIPB11E5RHQ5 1161 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 NDUFA3O95167 84 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 DAZAP2Q15038 168 aaPredicted RBP11.37□□□□□ -0.59
DUSP28-202ENST00000405954 SLC25A53Q5H9E4 307 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 MORN5Q5VZ52 161 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 MBD6Q96DN6 1003 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 MRPL32Q9BYC8 188 aaKnown RBP11.37□□□□□ -0.59
DUSP28-202ENST00000405954 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 CACNA1GO43497 2377 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
DUSP28-202ENST00000405954 TWIST1Q15672 202 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 ZNF329Q86UD4 541 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 ABHD17AQ96GS6 310 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 SIGLEC8Q9NYZ4 499 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 IGKCP01834 107 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 PPDPFLQ8WWR9 84 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 CNOT1A5YKK6 2376 aaKnown RBP11.37□□□□□ -0.59
DUSP28-202ENST00000405954 CACNA1HO95180 2353 aa11.37□□□□□ -0.59
DUSP28-202ENST00000405954 LILRA5A6NI73 299 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 FGF6P10767 208 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 PRR20EP86478 221 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 PRR20CP86479 221 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 PRR20DP86480 221 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 PRR20BP86481 221 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 PRR20AP86496 221 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 AGRNO00468 2067 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 LEPP41159 167 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 KLF17Q5JT82 389 aaPredicted RBP11.36□□□□□ -0.59
DUSP28-202ENST00000405954 ZNF562Q6V9R5 426 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 RPS19BP1Q86WX3 136 aaKnown RBP11.36□□□□□ -0.59
DUSP28-202ENST00000405954 SLC25A45Q8N413 288 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 WDR31Q8NA23 367 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 J3KRW8 73 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 LIFP15018 202 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 Q6P435 159 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 RND1Q92730 232 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 PKIBQ9C010 78 aa11.36□□□□□ -0.59
DUSP28-202ENST00000405954 IFITM1P13164 125 aa11.35□□□□□ -0.59
DUSP28-202ENST00000405954 KIR2DL4Q99706 377 aa11.35□□□□□ -0.59
DUSP28-202ENST00000405954 PF4V1P10720 104 aa11.35□□□□□ -0.59
DUSP28-202ENST00000405954 RRN3P1Q2M238 152 aa11.35□□□□□ -0.59
DUSP28-202ENST00000405954 DDB2Q92466 427 aa11.35□□□□□ -0.59
DUSP28-202ENST00000405954 ZNF503Q96F45 646 aa11.35□□□□□ -0.59
DUSP28-202ENST00000405954 KLK15Q9H2R5 256 aa11.35□□□□□ -0.59
DUSP28-202ENST00000405954 A0A1B0GXF2 115 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 CCDC179H3BU77 68 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 TIMM8AO60220 97 aaPredicted RBP11.34□□□□□ -0.59
DUSP28-202ENST00000405954 Q6ZSR3 168 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 MYOZ3Q8TDC0 251 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 PRNDQ9UKY0 176 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 E9PLD3 99 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 DLL1O00548 723 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 LINC01549A6NIU2 74 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 C15orf61A6NNL5 157 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 DPM2O94777 84 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 RPL7P18124 248 aaKnown RBP11.34□□□□□ -0.59
DUSP28-202ENST00000405954 LYZP61626 148 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 GUSBP11Q6P575 273 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 TUSC5Q8IXB3 177 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 IFI27L2Q9H2X8 130 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 FBXL15Q9H469 300 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 DMXL2Q8TDJ6 3036 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 GVINP1Q7Z2Y8 2422 aa11.34□□□□□ -0.59
DUSP28-202ENST00000405954 SUB1P53999 127 aaKnown RBP eCLIP11.33□□□□□ -0.6
DUSP28-202ENST00000405954 FOXG1P55316 489 aaPredicted RBP11.33□□□□□ -0.6
DUSP28-202ENST00000405954 FAM110AQ9BQ89 295 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 VCX2Q9H322 139 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 ODF1Q14990 250 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 TBC1D28Q2M2D7 210 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 LMO7DNF2Z398 122 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 BRWD1-AS2P59051 145 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 ZNF146Q15072 292 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 FAM159AQ6UWV7 190 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 LINC00322Q6ZN03 302 aaPredicted RBP11.33□□□□□ -0.6
DUSP28-202ENST00000405954 SLC25A48Q6ZT89 311 aaKnown RBP11.33□□□□□ -0.6
DUSP28-202ENST00000405954 Q9H3A6 140 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.6
DUSP28-202ENST00000405954 IGKV2D-26A0A0A0MRZ7 120 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 A0A1W2PQM1 296 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 TNFRSF1AP19438 455 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 ATP5J2P56134 94 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 A0A1W2PR77 199 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 FABP5P3A8MUU1 101 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 NDUFS7O75251 213 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 C3orf36Q3SXR2 165 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 Q6AWC8 147 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 DEFB108BQ8NET1 73 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 FMC1Q96HJ9 113 aa11.32□□□□□ -0.6
DUSP28-202ENST00000405954 PCNX2A6NKB5 2137 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms