RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 RAB1BQ9H0U4 201 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 DYNLRB1Q9NP97 96 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 LAMA5O15230 3695 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 PLCE1Q9P212 2302 aa3.03□□□□□ -1.92
RTN4-209ENST00000405240 FBLL1A6NHQ2 334 aaKnown RBP3.03□□□□□ -1.93
RTN4-209ENST00000405240 ENSAO43768 121 aaKnown RBP3.03□□□□□ -1.93
RTN4-209ENST00000405240 PRTN3P24158 256 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 DLX1P56177 255 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 SAPCD1Q5SSQ6 148 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 COL5A1-AS1Q5SY13 56 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 Q6AWC8 147 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 LHFPL4Q7Z7J7 247 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 CIARTQ8N365 385 aaPredicted RBP3.03□□□□□ -1.93
RTN4-209ENST00000405240 STPG4Q8N801 248 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 ORAOV1Q8WV07 137 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 NEU4Q8WWR8 484 aaPredicted RBP3.03□□□□□ -1.93
RTN4-209ENST00000405240 BORCS7Q96B45 105 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 TXN2Q99757 166 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 ST20Q9HBF5 79 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 PPP1R14DQ9NXH3 145 aa3.03□□□□□ -1.93
RTN4-209ENST00000405240 SYS1-DBNDD2H3BUS1 97 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 M0R2Z0 102 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 TIMM23O14925 209 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 KALRNO60229 2985 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 HLA-DRB1P01911 266 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 FOSL1P15407 271 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 IGLL1P15814 213 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 MAJINQ3KP22 176 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 LINC01545Q5VT33 79 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 LEMD1Q68G75 181 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 ZNF562Q6V9R5 426 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 DTX2Q86UW9 622 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 EXOC3-AS1Q8N2X6 119 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 DPF1Q92782 380 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 RASL11BQ9BPW5 248 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 TMEM70Q9BUB7 260 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 CNFNQ9BYD5 112 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 DPM3Q9P2X0 92 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 LAMTOR2Q9Y2Q5 125 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 FAM186AA6NE01 2351 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 A0A087X0K7 114 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 ADORA2A-AS1P86434 159 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 C5orf64Q2M2E5 130 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 LCN12Q6JVE5 192 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 PET117Q6UWS5 81 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 BPIFA4PQ86YQ2 179 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 RPEQ96AT9 228 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 RNF125Q96EQ8 232 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 PGLYRP4Q96LB8 373 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 SCRT2Q9NQ03 307 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 PSG8Q9UQ74 426 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 SMAD5-AS1Q9Y6J3 95 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 NCOR1O75376 2440 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 ZZEF1O43149 2961 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 A0A096LNJ9 63 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 LYNX1G3V0Z9 82 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 LYNX1P0DP58 116 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 ZNF25P17030 456 aaPredicted RBP3.02□□□□□ -1.93
RTN4-209ENST00000405240 HTR1DP28221 377 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 CDSNQ15517 529 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 MINOS1Q5TGZ0 78 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 DYNAPQ8N1N2 210 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 MINOS1-NBL1R4GNA1 71 aa3.02□□□□□ -1.93
RTN4-209ENST00000405240 PLXNB1O43157 2135 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 TRAV8-1A0A0A6YYK1 113 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 A0A1B0GUT8 65 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 HSBP1O75506 76 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 NPSP0C0P6 89 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 LYZP61626 148 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 C19orf54Q5BKX5 351 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 PRR27Q6MZM9 219 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 LINC00173Q6ZV60 143 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 GOLT1AQ6ZVE7 132 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 BCL6BQ8N143 479 aaPredicted RBP3.01□□□□□ -1.93
RTN4-209ENST00000405240 SGK494Q96LW2 274 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 SIRPDQ9H106 197 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 MS4A6AQ9H2W1 248 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 IGHV3-21A0A0B4J1V1 117 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 PRSS47A8MTI9 375 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 IGLC6P0CF74 106 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 GRNP28799 593 aaKnown RBP3.01□□□□□ -1.93
RTN4-209ENST00000405240 CAMPP49913 170 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 NDPQ00604 133 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 PSG9Q00887 426 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 DEFB125Q8N687 156 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 OR2D3Q8NGH3 330 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 LINC01560Q8TB33 94 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 MSRB2Q9Y3D2 182 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 GOLT1BQ9Y3E0 138 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.01□□□□□ -1.93
RTN4-209ENST00000405240 RBAKDNA6NC62 111 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 CTSGP08311 255 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 ARMS2P0C7Q2 107 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 CD24P25063 80 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 CEACAM3P40198 252 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 RIGQ13278 110 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 RNASEKQ6P5S7 137 aaKnown RBP3.01□□□□□ -1.93
RTN4-209ENST00000405240 Q6ZN92 141 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 PRNTQ86SH4 94 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 PIFOQ8TCI5 191 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms