RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 LINC00869P0C866 280 aa11.02□□□□□ -0.65
TPM1-207ENST00000403994 RRAS2P62070 204 aaPredicted RBP11.02□□□□□ -0.65
TPM1-207ENST00000403994 DLK1P80370 383 aa11.02□□□□□ -0.65
TPM1-207ENST00000403994 PSG9Q00887 426 aa11.02□□□□□ -0.65
TPM1-207ENST00000403994 TMEM14EPQ6UXP3 125 aa11.02□□□□□ -0.65
TPM1-207ENST00000403994 ZBTB8BQ8NAP8 495 aaPredicted RBP11.02□□□□□ -0.65
TPM1-207ENST00000403994 MITD1Q8WV92 249 aa11.02□□□□□ -0.65
TPM1-207ENST00000403994 RNF126Q9BV68 326 aa11.02□□□□□ -0.65
TPM1-207ENST00000403994 SLC25A39Q9BZJ4 359 aaPredicted RBP11.02□□□□□ -0.65
TPM1-207ENST00000403994 DEFB131BA0A096LNP1 70 aa11.01□□□□□ -0.65
TPM1-207ENST00000403994 IL5P05113 134 aa11.01□□□□□ -0.65
TPM1-207ENST00000403994 METTL15P1P0C7V9 234 aa11.01□□□□□ -0.65
TPM1-207ENST00000403994 S100A7P31151 101 aa11.01□□□□□ -0.65
TPM1-207ENST00000403994 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
TPM1-207ENST00000403994 HIGD1AQ9Y241 93 aa11.01□□□□□ -0.65
TPM1-207ENST00000403994 RFNGQ9Y644 331 aa11.01□□□□□ -0.65
TPM1-207ENST00000403994 DNAH2Q9P225 4427 aa11.01□□□□□ -0.65
TPM1-207ENST00000403994 TMEM189A5PLL7 270 aa11□□□□□ -0.65
TPM1-207ENST00000403994 SMIM9A6NGZ8 99 aa11□□□□□ -0.65
TPM1-207ENST00000403994 FNDC10F2Z333 226 aa11□□□□□ -0.65
TPM1-207ENST00000403994 PLA2G10O15496 165 aa11□□□□□ -0.65
TPM1-207ENST00000403994 TSC22D2O75157 780 aa11□□□□□ -0.65
TPM1-207ENST00000403994 EMP1P54849 157 aa11□□□□□ -0.65
TPM1-207ENST00000403994 TAS2R30P59541 319 aa11□□□□□ -0.65
TPM1-207ENST00000403994 PLP1P60201 277 aa11□□□□□ -0.65
TPM1-207ENST00000403994 SELENOTP62341 195 aa11□□□□□ -0.65
TPM1-207ENST00000403994 AMTNQ6UX39 209 aa11□□□□□ -0.65
TPM1-207ENST00000403994 RNF182Q8N6D2 247 aa11□□□□□ -0.65
TPM1-207ENST00000403994 UHRF2Q96PU4 802 aa11□□□□□ -0.65
TPM1-207ENST00000403994 FAT2Q9NYQ8 4349 aa11□□□□□ -0.65
TPM1-207ENST00000403994 TRAV8-2A0A0B4J237 113 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 K7EPK0 472 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 CCSO14618 274 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 LYRM1O43325 122 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 HYPMO75409 117 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 RAP2BP61225 183 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 SLC38A11Q08AI6 406 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 CNPY1Q3B7I2 92 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 IGFL4Q6B9Z1 124 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 C1orf158Q8N1D5 194 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 GSKIPQ9P0R6 139 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 MGAT4CQ9UBM8 478 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 GOLT1BQ9Y3E0 138 aa10.99□□□□□ -0.65
TPM1-207ENST00000403994 PKHD1P08F94 4074 aa10.98□□□□□ -0.65
TPM1-207ENST00000403994 MBPP02686 304 aaPredicted RBP10.98□□□□□ -0.65
TPM1-207ENST00000403994 OR5G3P0C626 314 aa10.98□□□□□ -0.65
TPM1-207ENST00000403994 SPART-AS1P0CW21 52 aa10.98□□□□□ -0.65
TPM1-207ENST00000403994 RPL7P18124 248 aaKnown RBP10.98□□□□□ -0.65
TPM1-207ENST00000403994 CNN1P51911 297 aaKnown RBP10.98□□□□□ -0.65
TPM1-207ENST00000403994 OR10P1Q8NGE3 313 aa10.98□□□□□ -0.65
TPM1-207ENST00000403994 NUDT15Q9NV35 164 aa10.98□□□□□ -0.65
TPM1-207ENST00000403994 DKK2Q9UBU2 259 aa10.98□□□□□ -0.65
TPM1-207ENST00000403994 A0A087X0K7 114 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 TEX48A0A1B0GUV7 120 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 C7orf66A4D0T2 115 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 HBE1P02100 147 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 FGL1Q08830 312 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 ARL16Q0P5N6 197 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 FAM222AQ5U5X8 452 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 TEPPQ6URK8 271 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 ZNF546Q86UE3 836 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 OR11H7Q8NGC8 314 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 ARL6Q9H0F7 186 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 NPVFQ9HCQ7 196 aa10.97□□□□□ -0.65
TPM1-207ENST00000403994 DNAH17Q9UFH2 4485 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 TRAV6A0A075B6T7 132 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 LOC102723971A0A1B0GUV8 181 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 M0R2Z0 102 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 TCRBP04435 133 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 SPINK13Q1W4C9 94 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 PATE2Q6UY27 113 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 ZNF738Q8NE65 137 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 IGF2BP2-AS1Q96M15 143 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 SEC22CQ9BRL7 303 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 NDUFAF3Q9BU61 184 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 NDUFA13Q9P0J0 144 aa10.96□□□□□ -0.65
TPM1-207ENST00000403994 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
TPM1-207ENST00000403994 INSP01308 110 aa10.95□□□□□ -0.66
TPM1-207ENST00000403994 CXCL3P19876 107 aa10.95□□□□□ -0.66
TPM1-207ENST00000403994 ZNF846Q147U1 533 aa10.95□□□□□ -0.66
TPM1-207ENST00000403994 RRN3P1Q2M238 152 aa10.95□□□□□ -0.66
TPM1-207ENST00000403994 BAP18Q8IXM2 172 aa10.95□□□□□ -0.66
TPM1-207ENST00000403994 GGACTQ9BVM4 153 aa10.95□□□□□ -0.66
TPM1-207ENST00000403994 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
TPM1-207ENST00000403994 YTHDF2Q9Y5A9 579 aaKnown RBP10.95□□□□□ -0.66
TPM1-207ENST00000403994 HERC2O95714 4834 aa10.95□□□□□ -0.66
TPM1-207ENST00000403994 FAM25EA8MYX2 175 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 BOLA2-SMG1P6H3BVE0 249 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 AGPAT2O15120 278 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
TPM1-207ENST00000403994 CRXO43186 299 aaPredicted RBP10.94□□□□□ -0.66
TPM1-207ENST00000403994 PXDC1Q5TGL8 231 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 S100A7AQ86SG5 101 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 ZNF431Q8TF32 576 aaPredicted RBP10.94□□□□□ -0.66
TPM1-207ENST00000403994 MGST2Q99735 147 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 NIPSNAP3BQ9BS92 247 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 TMEM208Q9BTX3 173 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 CCDC32Q9BV29 185 aa10.94□□□□□ -0.66
TPM1-207ENST00000403994 LSM5Q9Y4Y9 91 aaKnown RBP10.94□□□□□ -0.66
TPM1-207ENST00000403994 L7N2F9 121 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms