RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PLA2G2EQ9NZK7 142 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 PFDN2Q9UHV9 154 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 ZNF256Q9Y2P7 627 aaPredicted RBP11.95□□□□□ -0.5
HMGA1-204ENST00000401473 EIF3GO75821 320 aaKnown RBP eCLIP11.95□□□□□ -0.57e-7■■□□□ 12.9
HMGA1-204ENST00000401473 SPP1P10451 314 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 BMI1P35226 326 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 SERF2P84101 59 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 LCN12Q6JVE5 192 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 SIGLEC15Q6ZMC9 328 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 GRAMD2BQ96HH9 432 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 MS4A6AQ9H2W1 248 aa11.95□□□□□ -0.5
HMGA1-204ENST00000401473 PRKDCP78527 4128 aaKnown RBP11.95□□□□□ -0.5
HMGA1-204ENST00000401473 TRAV25A0A0B4J276 109 aa11.94□□□□□ -0.5
HMGA1-204ENST00000401473 BOLA2-SMG1P6H3BVE0 249 aa11.94□□□□□ -0.5
HMGA1-204ENST00000401473 MRPS12O15235 138 aaKnown RBP11.94□□□□□ -0.5
HMGA1-204ENST00000401473 M6PRP20645 277 aa11.94□□□□□ -0.5
HMGA1-204ENST00000401473 RAB2AP61019 212 aa11.94□□□□□ -0.5
HMGA1-204ENST00000401473 BAP18Q8IXM2 172 aa11.94□□□□□ -0.5
HMGA1-204ENST00000401473 GP9P14770 177 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 GUCA2BQ16661 112 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 MIR17HGQ75NE6 70 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 RPP25LQ8N5L8 163 aaKnown RBP11.93□□□□□ -0.5
HMGA1-204ENST00000401473 AGRNO00468 2067 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 CD5P06127 495 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
HMGA1-204ENST00000401473 TFPI2P48307 235 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 WFDC3Q8IUB2 231 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 STOML3Q8TAV4 291 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 DCANP1Q8TF63 244 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 FAM167A-AS1Q96KT0 104 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 PRR25Q96S07 402 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 SPAG8Q99932 426 aaPredicted RBP11.93□□□□□ -0.5
HMGA1-204ENST00000401473 RPRMQ9NS64 109 aa11.93□□□□□ -0.5
HMGA1-204ENST00000401473 HELTA6NFD8 242 aa11.92□□□□□ -0.5
HMGA1-204ENST00000401473 CD7P09564 240 aa11.92□□□□□ -0.5
HMGA1-204ENST00000401473 ACOT6Q3I5F7 207 aaPredicted RBP11.92□□□□□ -0.5
HMGA1-204ENST00000401473 OR10G4Q8NGN3 311 aa11.92□□□□□ -0.5
HMGA1-204ENST00000401473 OR10G9Q8NGN4 311 aa11.92□□□□□ -0.5
HMGA1-204ENST00000401473 OR10G7Q8NGN6 311 aa11.92□□□□□ -0.5
HMGA1-204ENST00000401473 FUT9Q9Y231 359 aa11.92□□□□□ -0.5
HMGA1-204ENST00000401473 S100A7P31151 101 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 S100A7AQ86SG5 101 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 FAM24BQ8N5W8 94 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 STXBP6Q8NFX7 210 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 SLC25A2Q9BXI2 301 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 NBEAL2Q6ZNJ1 2754 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 SEC11BP0C7V7 166 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 TPT1P13693 172 aaKnown RBP11.91□□□□□ -0.5
HMGA1-204ENST00000401473 DEFA6Q01524 100 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 SLC51BQ86UW2 128 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 Q8N1Y9 231 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 NRN1Q9NPD7 142 aa11.91□□□□□ -0.5
HMGA1-204ENST00000401473 H3BQ15 152 aa11.9□□□□□ -0.5
HMGA1-204ENST00000401473 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
HMGA1-204ENST00000401473 BPIFA4PQ86YQ2 179 aa11.9□□□□□ -0.5
HMGA1-204ENST00000401473 TMED6Q8WW62 240 aa11.9□□□□□ -0.5
HMGA1-204ENST00000401473 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
HMGA1-204ENST00000401473 GPR82Q96P67 336 aa11.9□□□□□ -0.5
HMGA1-204ENST00000401473 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
HMGA1-204ENST00000401473 K7EQG2 157 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 DNASE2O00115 360 aaPredicted RBP11.89□□□□□ -0.51
HMGA1-204ENST00000401473 HMGB3O15347 200 aaKnown RBP11.89□□□□□ -0.51
HMGA1-204ENST00000401473 PYYP10082 97 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 GALR1P47211 349 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 FHITP49789 147 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 RHOBP62745 196 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 FAM122CQ6P4D5 195 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 SSX7Q7RTT5 188 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 MRPL32Q9BYC8 188 aaKnown RBP11.89□□□□□ -0.51
HMGA1-204ENST00000401473 C19orf73Q9NVV2 129 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 MBP02144 154 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 IGLC2P0DOY2 106 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
HMGA1-204ENST00000401473 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 TMEM41BQ5BJD5 291 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 RAB24Q969Q5 203 aa11.89□□□□□ -0.51
HMGA1-204ENST00000401473 ZMAT5Q9UDW3 170 aaKnown RBP11.89□□□□□ -0.51
HMGA1-204ENST00000401473 A0A1W2PPV4 95 aa11.88□□□□□ -0.51
HMGA1-204ENST00000401473 H3BTX0 84 aa11.88□□□□□ -0.51
HMGA1-204ENST00000401473 SOCS3O14543 225 aa11.88□□□□□ -0.51
HMGA1-204ENST00000401473 WFDC10AQ9H1F0 79 aa11.88□□□□□ -0.51
HMGA1-204ENST00000401473 HRH4Q9H3N8 390 aa11.88□□□□□ -0.51
HMGA1-204ENST00000401473 RNF24Q9Y225 148 aa11.88□□□□□ -0.51
HMGA1-204ENST00000401473 OR4C46A6NHA9 309 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 AKR1C8PQ5T2L2 129 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 ZNF586Q9NXT0 402 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 UBQLN2Q9UHD9 624 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 TRAV2A0A0B4J234 112 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 OR10J4P0C629 311 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 CDC34P49427 236 aaPredicted RBP11.87□□□□□ -0.51
HMGA1-204ENST00000401473 CD81P60033 236 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 IGFL4Q6B9Z1 124 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
HMGA1-204ENST00000401473 OR51M1Q9H341 326 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 TMEM14CQ9P0S9 112 aa11.87□□□□□ -0.51
HMGA1-204ENST00000401473 A0A087X0K7 114 aa11.86□□□□□ -0.51
HMGA1-204ENST00000401473 K7EIL1 84 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms