RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 TCF15Q12870 199 aa6.94□□□□□ -1.3
CHD8-201ENST00000399982 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
CHD8-201ENST00000399982 POLR2AP24928 1970 aaKnown RBP6.94□□□□□ -1.3
CHD8-201ENST00000399982 VCYO14598 125 aa6.94□□□□□ -1.3
CHD8-201ENST00000399982 C4orf48Q5BLP8 95 aa6.94□□□□□ -1.3
CHD8-201ENST00000399982 NUP35Q8NFH5 326 aa6.94□□□□□ -1.3
CHD8-201ENST00000399982 SIGLEC12Q96PQ1 595 aa6.94□□□□□ -1.3
CHD8-201ENST00000399982 IGHV4-28A0A0C4DH34 117 aa6.94□□□□□ -1.3
CHD8-201ENST00000399982 RPP25LQ8N5L8 163 aaKnown RBP6.94□□□□□ -1.3
CHD8-201ENST00000399982 LINC00312Q9Y6C7 94 aa6.94□□□□□ -1.3
CHD8-201ENST00000399982 SAA2-SAA4A0A096LPE2 208 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 A0A0A6YYD4 124 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 C17orf98A8MV24 154 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 HLA-DMBP28068 263 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 SUPT4H1P63272 117 aaKnown RBP6.93□□□□□ -1.3
CHD8-201ENST00000399982 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 MRPS18CQ9Y3D5 142 aaKnown RBP6.93□□□□□ -1.3
CHD8-201ENST00000399982 B9A039 149 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 K7EMI3 77 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 ZNF497Q6ZNH5 498 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 TMEM141Q96I45 108 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 TRGV9Q99603 122 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 F5H768 121 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 EFEMP2O95967 443 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 DEFB130BP0DP73 79 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 DEFB130AP0DP74 79 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 PDE6HQ13956 83 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 hDV102S1A0JD36 115 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 SHISA9B4DS77 424 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 DEFB125Q8N687 156 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 NEU4Q8WWR8 484 aaPredicted RBP6.93□□□□□ -1.3
CHD8-201ENST00000399982 TIMM17AQ99595 171 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 CD24P25063 80 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 KLF14Q8TD94 323 aaPredicted RBP6.93□□□□□ -1.3
CHD8-201ENST00000399982 TINCRA0A1B0GVN0 87 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 CRLF1O75462 422 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.93□□□□□ -1.3
CHD8-201ENST00000399982 C1QL2Q7Z5L3 287 aa6.93□□□□□ -1.3
CHD8-201ENST00000399982 WNT2P09544 360 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 TMEM52Q8NDY8 209 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 DPM3Q9P2X0 92 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 SMIM20Q8N5G0 67 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 RNF5Q99942 180 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 MST1LQ2TV78 715 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 BVES-AS1Q5T3Y7 98 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 ZIC4Q8N9L1 334 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 RNF125Q96EQ8 232 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 TIMM21Q9BVV7 248 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 WDR81Q562E7 1941 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 D6R8Y8 96 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 GATA2P23769 480 aaPredicted RBP6.92□□□□□ -1.3
CHD8-201ENST00000399982 AHDC1Q5TGY3 1603 aaPredicted RBP6.92□□□□□ -1.3
CHD8-201ENST00000399982 IGHG2P01859 326 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 C18orf32Q8TCD1 76 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 ZNF236Q9UL36 1845 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 DOPEY2Q9Y3R5 2298 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 STPG1Q5TH74 334 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 SRSF8Q9BRL6 282 aaKnown RBP6.92□□□□□ -1.3
CHD8-201ENST00000399982 SIGLEC8Q9NYZ4 499 aa6.92□□□□□ -1.3
CHD8-201ENST00000399982 STRCQ7RTU9 1775 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 ATOX1O00244 68 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 FOXG1P55316 489 aaPredicted RBP6.91□□□□□ -1.3
CHD8-201ENST00000399982 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 ATP6V0E2Q8NHE4 81 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 IL9P15248 144 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 CMC4P56277 68 aaPredicted RBP6.91□□□□□ -1.3
CHD8-201ENST00000399982 NABP1Q96AH0 204 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 IGKV2-40A0A087WW87 121 aaPredicted RBP6.91□□□□□ -1.3
CHD8-201ENST00000399982 IGKV2D-40P01614 121 aaPredicted RBP6.91□□□□□ -1.3
CHD8-201ENST00000399982 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 DAD1P61803 113 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 SPANXB1Q9NS25 103 aaPredicted RBP6.91□□□□□ -1.3
CHD8-201ENST00000399982 PATE3B3GLJ2 98 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 PAX8Q06710 450 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 PAQR4Q8N4S7 273 aaPredicted RBP6.91□□□□□ -1.3
CHD8-201ENST00000399982 MYOFQ9NZM1 2061 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 AKAP6Q13023 2319 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 IGHV4-4A0A075B6R2 117 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 MORN5Q5VZ52 161 aa6.91□□□□□ -1.3
CHD8-201ENST00000399982 MORN2Q502X0 79 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 LCN12Q6JVE5 192 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 H3BQ85 93 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 K7ERS5 55 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 WIPF2Q8TF74 440 aaPredicted RBP6.9□□□□□ -1.3
CHD8-201ENST00000399982 SPSB3Q6PJ21 355 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 TMEM92Q6UXU6 159 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 LYPD6BQ8NI32 183 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 ZNF501Q96CX3 271 aaPredicted RBP6.9□□□□□ -1.3
CHD8-201ENST00000399982 IGLC7A0M8Q6 106 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 CELA2AP08217 269 aa6.9□□□□□ -1.3
CHD8-201ENST00000399982 SRSF2Q01130 221 aaKnown RBP6.9□□□□□ -1.3
CHD8-201ENST00000399982 GFI1Q99684 422 aa6.9□□□□□ -1.31
CHD8-201ENST00000399982 LINC00527Q9UJ94 153 aa6.9□□□□□ -1.31
CHD8-201ENST00000399982 KLRD1Q13241 179 aa6.9□□□□□ -1.31
CHD8-201ENST00000399982 CDKN1AP38936 164 aa6.9□□□□□ -1.31
CHD8-201ENST00000399982 CLPSL2Q6UWE3 100 aa6.9□□□□□ -1.31
CHD8-201ENST00000399982 RNF183Q96D59 192 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms