RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ARL14EPLP0DKL9 152 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 NPPCP23582 126 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 SYNJ2BPP57105 145 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 NSUN5P1Q3KNT7 163 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 KHDC3LQ587J8 217 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 S100A7AQ86SG5 101 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 C1QL4Q86Z23 238 aa12.9□□□□□ -0.34
TSPAN4-205ENST00000397406 CXorf1O96002 111 aa12.89□□□□□ -0.35
TSPAN4-205ENST00000397406 TM4SF20Q53R12 229 aa12.89□□□□□ -0.35
TSPAN4-205ENST00000397406 PQLC2Q6ZP29 291 aa12.89□□□□□ -0.35
TSPAN4-205ENST00000397406 TMPRSS5Q9H3S3 457 aa12.89□□□□□ -0.35
TSPAN4-205ENST00000397406 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-205ENST00000397406 UFC1Q9Y3C8 167 aa12.89□□□□□ -0.35
TSPAN4-205ENST00000397406 PRKDCP78527 4128 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 LINC00862A6NCI5 91 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 TEX46H3BTG2 121 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 BUB3O43684 328 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 GP9P14770 177 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 S100A7P31151 101 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 IGHV3-49A0A0A0MS15 119 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 M0QZ24 198 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 MRPS12O15235 138 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 OR7C2O60412 319 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 PYYP10082 97 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 EDN2P20800 178 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 GCHFRP30047 84 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 DLX4Q92988 240 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 PAXXQ9BUH6 204 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 MED9Q9NWA0 146 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 TMEM14CQ9P0S9 112 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 PFDN2Q9UHV9 154 aa12.88□□□□□ -0.35
TSPAN4-205ENST00000397406 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
TSPAN4-205ENST00000397406 C1orf194Q5T5A4 169 aa12.87□□□□□ -0.35
TSPAN4-205ENST00000397406 STXBP6Q8NFX7 210 aa12.87□□□□□ -0.35
TSPAN4-205ENST00000397406 SUN5Q8TC36 379 aa12.87□□□□□ -0.35
TSPAN4-205ENST00000397406 FXYD5Q96DB9 178 aa12.87□□□□□ -0.35
TSPAN4-205ENST00000397406 SMPXQ9UHP9 88 aa12.87□□□□□ -0.35
TSPAN4-205ENST00000397406 RNF24Q9Y225 148 aa12.87□□□□□ -0.35
TSPAN4-205ENST00000397406 NOTCH1P46531 2555 aa12.87□□□□□ -0.35
TSPAN4-205ENST00000397406 IGHV3OR16-13A0A075B7E8 117 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 IGHV3-74A0A0B4J1X5 117 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 IGHV3-66A0A0C4DH42 116 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 OR10J4P0C629 311 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 MYCNOSP40205 109 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 PSMB3P49720 205 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 PMS2P11Q13670 270 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 BPIFA4PQ86YQ2 179 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 IQCF2Q8IXL9 164 aa12.86□□□□□ -0.35
TSPAN4-205ENST00000397406 C2orf70A6NJV1 201 aa12.85□□□□□ -0.35
TSPAN4-205ENST00000397406 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-205ENST00000397406 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
TSPAN4-205ENST00000397406 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
TSPAN4-205ENST00000397406 NARS2Q96I59 477 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-205ENST00000397406 TMEM167BQ9NRX6 74 aa12.85□□□□□ -0.35
TSPAN4-205ENST00000397406 A0A1W2PS18 150 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 CHEK1O14757 476 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 IGLC2P0DOY2 106 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 RPL7P18124 248 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 ADAMTSL5Q6ZMM2 481 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 OR9G4Q8NGQ1 327 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 MARC2Q969Z3 335 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 FAM210AQ96ND0 272 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 RHPN1-AS1Q9BWJ2 59 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 GNG13Q9P2W3 67 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 SMAD5-AS1Q9Y6J3 95 aa12.84□□□□□ -0.35
TSPAN4-205ENST00000397406 H3BQ15 152 aa12.83□□□□□ -0.36
TSPAN4-205ENST00000397406 HIST1H1EP10412 219 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-205ENST00000397406 CBLN1P23435 193 aa12.83□□□□□ -0.36
TSPAN4-205ENST00000397406 COMMD7Q86VX2 200 aa12.83□□□□□ -0.36
TSPAN4-205ENST00000397406 GPR82Q96P67 336 aa12.83□□□□□ -0.36
TSPAN4-205ENST00000397406 ZNF586Q9NXT0 402 aa12.83□□□□□ -0.36
TSPAN4-205ENST00000397406 PEMTQ9UBM1 199 aa12.83□□□□□ -0.36
TSPAN4-205ENST00000397406 SNRPCP09234 159 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-205ENST00000397406 PPT1P50897 306 aa12.82□□□□□ -0.36
TSPAN4-205ENST00000397406 OR4F17Q8NGA8 305 aa12.82□□□□□ -0.36
TSPAN4-205ENST00000397406 GRAMD2BQ96HH9 432 aa12.82□□□□□ -0.36
TSPAN4-205ENST00000397406 C17orf77Q96MU5 243 aa12.82□□□□□ -0.36
TSPAN4-205ENST00000397406 OR4F4Q96R69 305 aa12.82□□□□□ -0.36
TSPAN4-205ENST00000397406 MANBALQ9NQG1 85 aa12.82□□□□□ -0.36
TSPAN4-205ENST00000397406 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 RAB19A4D1S5 217 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 OVOL1O14753 267 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 IFNA1P01562 189 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 CSN3P07498 182 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 NBEAP1P0C6P0 100 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 FOLR2P14207 255 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 NDUFA5Q16718 116 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 GUK1Q16774 197 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 HAGHQ16775 308 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 SIGLEC15Q6ZMC9 328 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 ELOVL1Q9BW60 279 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 TMEM231Q9H6L2 316 aa12.81□□□□□ -0.36
TSPAN4-205ENST00000397406 TRBV19A0A075B6N1 114 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 A0A087X0K7 114 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 PAGE4O60829 102 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms