RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 YPEL2Q96QA6 119 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 TRIOBPQ9H2D6 2365 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 OVOL3O00110 214 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BKO60814 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BJP06899 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BOP23527 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BBP33778 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BDP58876 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BCP62807 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST2H2BEQ16778 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BHQ93079 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BNQ99877 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BMQ99879 126 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 TRBV20-1A0A075B6N2 111 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 FGF6P10767 208 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 CFHR2P36980 270 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 ANKRD39Q53RE8 183 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 Q6ZQT7 251 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 SHISA9B4DS77 424 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 E9PQ18 207 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 J3QW42 95 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 SLC25A16P16260 332 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 SPTSSBQ8NFR3 76 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 XCL1P47992 114 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 RUSC1-AS1Q66K80 236 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 GREM1O60565 184 aa10.1□□□□□ -0.79
SMU1-201ENST00000397149 RPRMLQ8N4K4 120 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 NUP35Q8NFH5 326 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 TRBV7-1A0A0A6YYK4 115 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 TSSC4Q9Y5U2 329 aaPredicted RBP10.09□□□□□ -0.79
SMU1-201ENST00000397149 LINC01549A6NIU2 74 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 IGHG2P01859 326 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 UBE2E1P51965 193 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 TRPT1Q86TN4 253 aaKnown RBP10.09□□□□□ -0.79
SMU1-201ENST00000397149 HIST1H2BLQ99880 126 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 ARMS2P0C7Q2 107 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 FAM104BQ5XKR9 115 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 B4DSR2 109 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 TMEM200BQ69YZ2 307 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 SCN9AQ15858 1988 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 PKD1L3Q7Z443 1732 aa10.09□□□□□ -0.79
SMU1-201ENST00000397149 ACYP1P07311 99 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 SLC25A48Q6ZT89 311 aaKnown RBP10.08□□□□□ -0.8
SMU1-201ENST00000397149 IGHV1-3A0A0C4DH29 117 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 ZNF503Q96F45 646 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 IL17RELQ6ZVW7 336 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 TRAV26-2A0A0B4J265 109 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 IGHV1-18A0A0C4DH31 117 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 RHODO00212 210 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 SPTA1P02549 2419 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 C4orf51C9J302 202 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 IGHV1-46P01743 117 aa10.08□□□□□ -0.8
SMU1-201ENST00000397149 CARHSP1Q9Y2V2 147 aaKnown RBP10.08□□□□□ -0.8
SMU1-201ENST00000397149 BUB3O43684 328 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 CSRP2Q16527 193 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 C18orf12Q96KH6 178 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 ETDCA0A1B0GVM5 59 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 DSCR9P59020 149 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 CHCHD2Q9Y6H1 151 aaPredicted RBP10.07□□□□□ -0.8
SMU1-201ENST00000397149 KIAA2026Q5HYC2 2103 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 CXCL1P09341 107 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 CARD19Q96LW7 228 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 MPDZO75970 2070 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 MYO7BQ6PIF6 2116 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 A0A087WW49 117 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 C9orf139Q6ZV77 190 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 NRAPQ86VF7 1730 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 FAM186AA6NE01 2351 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 SMCHD1A6NHR9 2005 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 ZNF497Q6ZNH5 498 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 ALS2Q96Q42 1657 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 SYS1-DBNDD2H3BUS1 97 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 TM2D1Q9BX74 207 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 C1QTNF5Q9BXJ0 243 aa10.07□□□□□ -0.8
SMU1-201ENST00000397149 TOGARAM1Q9Y4F4 1720 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 IFITM2Q01629 132 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 IGHMP01871 453 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 TRBV5-3A0A0A0MS03 114 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 AMBPP02760 352 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 TRAV3A0A0B4J244 114 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 NDUFB1O75438 58 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 TIRAPP58753 221 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 TEX22C9J3V5 150 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 UBE2CO00762 179 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 GZMMP51124 257 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 APOC4P55056 127 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 EFNA4P52798 201 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 ANKRD29Q8N6D5 301 aa10.06□□□□□ -0.8
SMU1-201ENST00000397149 FOXF2Q12947 444 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 CT83Q5H943 113 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 FAM181AQ8N9Y4 354 aa10.05□□□□□ -0.8
SMU1-201ENST00000397149 LINC01590Q5TEZ4 76 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms