RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 RMI2Q96E14 147 aa14.19□□□□□ -0.14
MCF2L-208ENST00000397030 BRCA1P38398 1863 aaKnown RBP14.19□□□□□ -0.14
MCF2L-208ENST00000397030 DDTP30046 118 aa14.19□□□□□ -0.14
MCF2L-208ENST00000397030 TCF15Q12870 199 aa14.19□□□□□ -0.14
MCF2L-208ENST00000397030 NIT1Q86X76 327 aa14.19□□□□□ -0.14
MCF2L-208ENST00000397030 ERG28Q9UKR5 140 aa14.19□□□□□ -0.14
MCF2L-208ENST00000397030 TRAV25A0A0B4J276 109 aa14.18□□□□□ -0.14
MCF2L-208ENST00000397030 IGFBP3P17936 291 aaPredicted RBP14.18□□□□□ -0.14
MCF2L-208ENST00000397030 A8MXK9 166 aa14.18□□□□□ -0.14
MCF2L-208ENST00000397030 NRXN2Q9P2S2 1712 aa14.18□□□□□ -0.14
MCF2L-208ENST00000397030 NDUFS5O43920 106 aa14.18□□□□□ -0.14
MCF2L-208ENST00000397030 IGKV1-12A0A0C4DH73 117 aa14.18□□□□□ -0.14
MCF2L-208ENST00000397030 IGKV1D-12P01611 117 aa14.18□□□□□ -0.14
MCF2L-208ENST00000397030 PRIMA1Q86XR5 153 aa14.18□□□□□ -0.14
MCF2L-208ENST00000397030 TCTEX1D4Q5JR98 221 aa14.17□□□□□ -0.14
MCF2L-208ENST00000397030 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
MCF2L-208ENST00000397030 LINC00587B1AMM8 73 aa14.17□□□□□ -0.14
MCF2L-208ENST00000397030 TRBV25-1A0A075B6N4 114 aa14.17□□□□□ -0.14
MCF2L-208ENST00000397030 A0A1B0GV90 55 aa14.17□□□□□ -0.14
MCF2L-208ENST00000397030 IGKV1D-17A0A075B6S4 117 aa14.17□□□□□ -0.14
MCF2L-208ENST00000397030 OCC1Q8TAD7 63 aa14.17□□□□□ -0.14
MCF2L-208ENST00000397030 TMEM238C9JI98 176 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 SCN5AQ14524 2016 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 IGKV1D-8A0A087WSZ0 117 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 IGHV2-70DA0A0C4DH43 119 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 VCYO14598 125 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 NXPH4O95158 308 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 UBE2E1P51965 193 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 TCF20Q9UGU0 1960 aaKnown RBP14.16□□□□□ -0.14
MCF2L-208ENST00000397030 IGKV1-5P01602 117 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 ZNF562Q6V9R5 426 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 KLF12Q9Y4X4 402 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 DOCK3Q8IZD9 2030 aa14.16□□□□□ -0.14
MCF2L-208ENST00000397030 RALGAPA1Q6GYQ0 2036 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 IGKV1-27A0A075B6S5 117 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 PPBPP02775 128 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 TREML4Q6UXN2 200 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 PMVKQ15126 192 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 SHISA3A0PJX4 238 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 SUPT4H1P63272 117 aaKnown RBP14.15□□□□□ -0.14
MCF2L-208ENST00000397030 MGST2Q99735 147 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 PSG3Q16557 428 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 IFI27L1Q96BM0 104 aa14.15□□□□□ -0.14
MCF2L-208ENST00000397030 FAM120AOSQ5T036 256 aa14.14□□□□□ -0.15
MCF2L-208ENST00000397030 RASL11AQ6T310 242 aa14.14□□□□□ -0.15
MCF2L-208ENST00000397030 SPTBP11277 2137 aa14.14□□□□□ -0.15
MCF2L-208ENST00000397030 A0A1W2PRE2 83 aa14.14□□□□□ -0.15
MCF2L-208ENST00000397030 LGALS1P09382 135 aaKnown RBP14.14□□□□□ -0.15
MCF2L-208ENST00000397030 ARHGEF17Q96PE2 2063 aaPredicted RBP14.14□□□□□ -0.15
MCF2L-208ENST00000397030 TRGV9Q99603 122 aa14.14□□□□□ -0.15
MCF2L-208ENST00000397030 RNF5Q99942 180 aa14.13□□□□□ -0.15
MCF2L-208ENST00000397030 DERL1Q9BUN8 251 aa14.13□□□□□ -0.15
MCF2L-208ENST00000397030 GGTLC1Q9BX51 225 aa14.13□□□□□ -0.15
MCF2L-208ENST00000397030 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.13□□□□□ -0.15
MCF2L-208ENST00000397030 PRTN3P24158 256 aa14.13□□□□□ -0.15
MCF2L-208ENST00000397030 TSKUQ8WUA8 353 aa14.13□□□□□ -0.15
MCF2L-208ENST00000397030 TRAV8-3A0A0A6YYJ7 113 aa14.13□□□□□ -0.15
MCF2L-208ENST00000397030 TRAV8-1A0A0A6YYK1 113 aa14.13□□□□□ -0.15
MCF2L-208ENST00000397030 FAM90A9PA6NNJ1 464 aa14.13□□□□□ -0.15
MCF2L-208ENST00000397030 ANGP03950 147 aaKnown RBP14.13□□□□□ -0.15
MCF2L-208ENST00000397030 RBMY1FQ15415 496 aaKnown RBP14.13□□□□□ -0.15
MCF2L-208ENST00000397030 PLEKHB2Q96CS7 222 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 TIMM21Q9BVV7 248 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 CABIN1Q9Y6J0 2220 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 IGKV1-39P01597 117 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 IGKV1D-39P04432 117 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 MLANAQ16655 118 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 CACNA1GO43497 2377 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 RP1P56715 2156 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 SCN10AQ9Y5Y9 1956 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 CFHR2P36980 270 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 KLF5Q13887 457 aaPredicted RBP14.12□□□□□ -0.15
MCF2L-208ENST00000397030 GAGE2EQ4V326 116 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 ZNRF2Q8NHG8 242 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 GAGE2DQ9UEU5 116 aa14.12□□□□□ -0.15
MCF2L-208ENST00000397030 TBX6O95947 436 aaPredicted RBP14.11□□□□□ -0.15
MCF2L-208ENST00000397030 LOC285556D6RIA3 1793 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 C5orf63A6NC05 138 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 DEFB136Q30KP8 78 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 Q6ZQT7 251 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 WFDC1Q9HC57 220 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 TRPM7Q96QT4 1865 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 PRSS29PA6NIE9 313 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 WISP1O95388 367 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 PCP4P48539 62 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 FAM90A2PQ658T7 463 aa14.11□□□□□ -0.15
MCF2L-208ENST00000397030 RPL18AQ02543 176 aaKnown RBP14.11□□□□□ -0.15
MCF2L-208ENST00000397030 LINC00473A8K010 186 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 ESDP10768 282 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 TRIOBPQ9H2D6 2365 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 J3QLI3 93 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 LMO1P25800 156 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 TAL2Q16559 108 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 DEFB105AQ8NG35 78 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 NRGNQ92686 78 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 IGHG3P01860 377 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 GAS1P54826 345 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 MYMXA0A1B0GTQ4 84 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 C8orf49Q96NF6 230 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 OSTCQ9NRP0 149 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms