RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 IGLC1P0CG04 106 aa13.5□□□□□ -0.25
TNFSF13-205ENST00000396545 FLI1Q01543 452 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13-205ENST00000396545 KIAA0141Q14154 515 aaPredicted RBP13.5□□□□□ -0.25
TNFSF13-205ENST00000396545 C10orf99Q6UWK7 81 aa13.5□□□□□ -0.25
TNFSF13-205ENST00000396545 FAM24BQ8N5W8 94 aa13.5□□□□□ -0.25
TNFSF13-205ENST00000396545 IGLV11-55A0A075B6I3 123 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 SH2D7A6NKC9 451 aaPredicted RBP13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 ATP6V0E1O15342 81 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 NDUFB4O95168 129 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 IGF1P05019 195 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 UNQ5815/PRO19632Q6UWF5 114 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 ZNF355PQ9NSJ1 428 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 IGHV3-21A0A0B4J1V1 117 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 SCO2A0A1W2PP80 73 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 A0A1W2PRE2 83 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 OR7C2O60412 319 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 RAB5AP20339 215 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 ADIRFQ15847 76 aa13.49□□□□□ -0.25
TNFSF13-205ENST00000396545 TRAV5A0A0B4J249 113 aa13.48□□□□□ -0.25
TNFSF13-205ENST00000396545 BRI3O95415 125 aa13.48□□□□□ -0.25
TNFSF13-205ENST00000396545 KRTAP10-11P60412 298 aa13.48□□□□□ -0.25
TNFSF13-205ENST00000396545 ELOBQ15370 118 aa13.48□□□□□ -0.25
TNFSF13-205ENST00000396545 FANCD2OSQ96PS1 177 aa13.48□□□□□ -0.25
TNFSF13-205ENST00000396545 UHRF2Q96PU4 802 aa13.48□□□□□ -0.25
TNFSF13-205ENST00000396545 MLXQ9UH92 298 aa13.48□□□□□ -0.25
TNFSF13-205ENST00000396545 FABP1P07148 127 aa13.47□□□□□ -0.25
TNFSF13-205ENST00000396545 KHDC1LQ5JSQ8 128 aa13.47□□□□□ -0.25
TNFSF13-205ENST00000396545 DERL1Q9BUN8 251 aa13.47□□□□□ -0.25
TNFSF13-205ENST00000396545 TRAV30A0A087WSZ9 112 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 TRAV41A0A0B4J266 112 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 H3BUA1 57 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 AP4M1O00189 453 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 SCGB2A1O75556 95 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 IGKV1-17P01599 117 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 EGFEM1PQ0D2K5 195 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 LINC00305Q7Z4B0 112 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 LINC01551Q86U37 167 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 LINC00482Q8N8I6 264 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 VN1R17PQ8TDU5 208 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 Q8WTZ3 238 aa13.46□□□□□ -0.25
TNFSF13-205ENST00000396545 HYPMO75409 117 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 OR10J4P0C629 311 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 FCGR2BP31994 310 aaPredicted RBP13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 UBE2L3P68036 154 aaKnown RBP13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 ECSCRQ19T08 205 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 C19orf54Q5BKX5 351 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 C9orf152Q5JTZ5 239 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 ZNF343Q6P1L6 599 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 STXBP6Q8NFX7 210 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 OR5T1Q8NG75 326 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 OR1B1Q8NGR6 318 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 TXN2Q99757 166 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 PAXXQ9BUH6 204 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 OR51M1Q9H341 326 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 TRBV20OR9-2A0A075B6H5 130 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 WI2-2373I1.2A0A1W2PRP0 233 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 GGTLC3B5MD39 225 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 PSG1P11464 419 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 ORM2P19652 201 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 MFAP4P55083 255 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 TIGITQ495A1 244 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 FXYD5Q96DB9 178 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 ANAPC16Q96DE5 110 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 ATP6V0BQ99437 205 aa13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 GAR1Q9NY12 217 aaKnown RBP13.45□□□□□ -0.26
TNFSF13-205ENST00000396545 DNAH9Q9NYC9 4486 aa13.44□□□□□ -0.26
TNFSF13-205ENST00000396545 TRBV9A0A0B4J1U6 114 aa13.44□□□□□ -0.26
TNFSF13-205ENST00000396545 C9JCJ5 164 aa13.44□□□□□ -0.26
TNFSF13-205ENST00000396545 CXCL1P09341 107 aa13.44□□□□□ -0.26
TNFSF13-205ENST00000396545 ZNF329Q86UD4 541 aa13.44□□□□□ -0.26
TNFSF13-205ENST00000396545 NECAP1Q8NC96 275 aa13.44□□□□□ -0.26
TNFSF13-205ENST00000396545 LY96Q9Y6Y9 160 aa13.44□□□□□ -0.26
TNFSF13-205ENST00000396545 C1orf196B1AJZ1 125 aa13.43□□□□□ -0.26
TNFSF13-205ENST00000396545 TOMM40O96008 361 aa13.43□□□□□ -0.26
TNFSF13-205ENST00000396545 PYYP10082 97 aa13.43□□□□□ -0.26
TNFSF13-205ENST00000396545 HOXD3P31249 432 aaPredicted RBP13.43□□□□□ -0.26
TNFSF13-205ENST00000396545 C21orf62Q9NYP8 219 aa13.43□□□□□ -0.26
TNFSF13-205ENST00000396545 MRPL27Q9P0M9 148 aaKnown RBP13.43□□□□□ -0.26
TNFSF13-205ENST00000396545 FAM223BA6NKX1 122 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 LINC01548A6NM66 108 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 F8W735 103 aaPredicted RBP13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 RAB5BP61020 215 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 YPEL3P61236 119 aaPredicted RBP13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 FAM223AQ8IWN6 122 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 C2CD4CQ8TF44 421 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 GPR61Q9BZJ8 451 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 FBXL7Q9UJT9 491 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 HIGD1AQ9Y241 93 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 URGCP-MRPS24S4R325 110 aa13.42□□□□□ -0.26
TNFSF13-205ENST00000396545 TRBV24-1A0A075B6N3 115 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 TGIF2-C20orf24A0A0A6YYL0 155 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 G3V318 75 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 H7BYZ3 331 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 RD3LP0DJH9 198 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 GP9P14770 177 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 NOL4LQ96MY1 436 aaPredicted RBP13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 OR2J3O76001 311 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 NDUFB8O95169 186 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 CRYBB3P26998 211 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms