RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 BRS3P32247 399 aa13.17□□□□□ -0.3
NUP50-202ENST00000396096 SIGLEC15Q6ZMC9 328 aa13.17□□□□□ -0.3
NUP50-202ENST00000396096 LINC00322Q6ZN03 302 aaPredicted RBP13.17□□□□□ -0.3
NUP50-202ENST00000396096 EXOC3-AS1Q8N2X6 119 aa13.17□□□□□ -0.3
NUP50-202ENST00000396096 TXN2Q99757 166 aa13.17□□□□□ -0.3
NUP50-202ENST00000396096 NDUFB8O95169 186 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 GOSR1O95249 250 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 ITPR1Q14643 2758 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 A0A1B0GXF2 115 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 HIGD1CA8MV81 97 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 A8MWL6 223 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 NPIPB6E9PJ23 425 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 F2Z2F3 143 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 PDE6HQ13956 83 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 Q56UQ5 140 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 FAM120AOSQ5T036 256 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 TMEM75Q8N9X5 138 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 GFRA4Q9GZZ7 299 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 S4R3C0 116 aa13.16□□□□□ -0.3
NUP50-202ENST00000396096 FAM231BA6NCW3 169 aa13.15□□□□□ -0.3
NUP50-202ENST00000396096 SCGB2A1O75556 95 aa13.15□□□□□ -0.3
NUP50-202ENST00000396096 P01737 135 aa13.15□□□□□ -0.3
NUP50-202ENST00000396096 SAA4P35542 130 aa13.15□□□□□ -0.3
NUP50-202ENST00000396096 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
NUP50-202ENST00000396096 GOLT1AQ6ZVE7 132 aa13.15□□□□□ -0.3
NUP50-202ENST00000396096 ZNF664Q8N3J9 261 aa13.15□□□□□ -0.3
NUP50-202ENST00000396096 FAM110DQ8TAY7 271 aaPredicted RBP13.15□□□□□ -0.3
NUP50-202ENST00000396096 VN1R17PQ8TDU5 208 aa13.15□□□□□ -0.3
NUP50-202ENST00000396096 SOX21Q9Y651 276 aaPredicted RBP13.15□□□□□ -0.3
NUP50-202ENST00000396096 OR2J3O76001 311 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 IGHV4-39P01824 125 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 DDTP30046 118 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 KIAA1644Q3SXP7 199 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 OR4B1Q8NGF8 309 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 C17orf77Q96MU5 243 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
NUP50-202ENST00000396096 PRO1933Q9H354 126 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 TACC2O95359 2948 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 TMEM8BA6NDV4 472 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 VWC2LB2RUY7 222 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 NPFFO15130 113 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 SRIP30626 198 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 SLAQ13239 276 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 Q6ZWC4 215 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 NAGKQ9UJ70 344 aa13.14□□□□□ -0.31
NUP50-202ENST00000396096 TRAV8-1A0A0A6YYK1 113 aa13.13□□□□□ -0.31
NUP50-202ENST00000396096 DEFA6Q01524 100 aa13.13□□□□□ -0.31
NUP50-202ENST00000396096 FAM209BQ5JX69 171 aa13.13□□□□□ -0.31
NUP50-202ENST00000396096 DAZAP1Q96EP5 407 aaKnown RBP13.13□□□□□ -0.31
NUP50-202ENST00000396096 HSPB9Q9BQS6 159 aa13.13□□□□□ -0.31
NUP50-202ENST00000396096 FBXL7Q9UJT9 491 aa13.13□□□□□ -0.31
NUP50-202ENST00000396096 ZFP30Q9Y2G7 519 aa13.13□□□□□ -0.31
NUP50-202ENST00000396096 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
NUP50-202ENST00000396096 K7EQM0 130 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 SCGB1D1O95968 90 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 CTSGP08311 255 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 KCNS1Q96KK3 526 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 CENPVL3A0A0U1RRI6 287 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 ZNF253O75346 499 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 GPX1P07203 203 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 PAX8Q06710 450 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 KLF5Q13887 457 aaPredicted RBP13.12□□□□□ -0.31
NUP50-202ENST00000396096 PRNTQ86SH4 94 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
NUP50-202ENST00000396096 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 GTSF1Q8WW33 167 aa13.12□□□□□ -0.31
NUP50-202ENST00000396096 A8MWP6 167 aa13.11□□□□□ -0.31
NUP50-202ENST00000396096 DIRC3C9JPN6 131 aa13.11□□□□□ -0.31
NUP50-202ENST00000396096 PSG3Q16557 428 aa13.11□□□□□ -0.31
NUP50-202ENST00000396096 TCF24Q7RTU0 167 aa13.11□□□□□ -0.31
NUP50-202ENST00000396096 REC114Q7Z4M0 266 aa13.11□□□□□ -0.31
NUP50-202ENST00000396096 CIARTQ8N365 385 aaPredicted RBP13.11□□□□□ -0.31
NUP50-202ENST00000396096 SAMD10Q9BYL1 202 aa13.11□□□□□ -0.31
NUP50-202ENST00000396096 SERTM2A0A1B0GWG4 89 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 OR2T8A6NH00 312 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 ZNF785A8K8V0 405 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 HBBP68871 147 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 RBPMS2Q6ZRY4 209 aaKnown RBP13.1□□□□□ -0.31
NUP50-202ENST00000396096 C18orf32Q8TCD1 76 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 RCHY1Q96PM5 261 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 A0A1W2PS18 150 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 ATP6V0E1O15342 81 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 RPL7P18124 248 aaKnown RBP13.1□□□□□ -0.31
NUP50-202ENST00000396096 COL8A1P27658 744 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 S100A7P31151 101 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 FOXA3P55318 350 aaPredicted RBP13.1□□□□□ -0.31
NUP50-202ENST00000396096 PSG9Q00887 426 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 UNQ5815/PRO19632Q6UWF5 114 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 SIGLECL1Q8N7X8 197 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 ZNF502Q8TBZ5 544 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 C14orf144Q96I85 54 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 AAMDCQ9H7C9 122 aa13.1□□□□□ -0.31
NUP50-202ENST00000396096 IGHV3-23P01764 117 aa13.09□□□□□ -0.31
NUP50-202ENST00000396096 ZC2HC1AQ96GY0 325 aa13.09□□□□□ -0.31
NUP50-202ENST00000396096 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
NUP50-202ENST00000396096 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms