RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 GSG1LQ6UXU4 331 aa14.03□□□□□ -0.16
UPK3B-203ENST00000394849 SMIM8Q96KF7 97 aa14.03□□□□□ -0.16
UPK3B-203ENST00000394849 PRAF2O60831 178 aa14.02□□□□□ -0.17
UPK3B-203ENST00000394849 HNRNPCP07910 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
UPK3B-203ENST00000394849 RD3LP0DJH9 198 aa14.02□□□□□ -0.17
UPK3B-203ENST00000394849 EMP1P54849 157 aa14.02□□□□□ -0.17
UPK3B-203ENST00000394849 Q8N1X5 172 aa14.02□□□□□ -0.17
UPK3B-203ENST00000394849 GLMPQ8WWB7 406 aa14.02□□□□□ -0.17
UPK3B-203ENST00000394849 C2orf50Q96LR7 162 aa14.02□□□□□ -0.17
UPK3B-203ENST00000394849 DKK2Q9UBU2 259 aa14.02□□□□□ -0.17
UPK3B-203ENST00000394849 L7N2F9 121 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 TOMM40O96008 361 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 MBPP02686 304 aaPredicted RBP14.01□□□□□ -0.17
UPK3B-203ENST00000394849 IL4P05112 153 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 FABP1P07148 127 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 HLA-DRB4P13762 266 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 VAMP2P63027 116 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 OR8G2PQ6IF36 304 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 NRN1Q9NPD7 142 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 RCL1Q9Y2P8 373 aaKnown RBP14.01□□□□□ -0.17
UPK3B-203ENST00000394849 LSM5Q9Y4Y9 91 aaKnown RBP14.01□□□□□ -0.17
UPK3B-203ENST00000394849 HLA-DRB4X5D2U9 266 aa14.01□□□□□ -0.17
UPK3B-203ENST00000394849 SNRPGP15A8MWD9 76 aa14□□□□□ -0.17
UPK3B-203ENST00000394849 TAS2R30P59541 319 aa14□□□□□ -0.17
UPK3B-203ENST00000394849 AKR1C1Q04828 323 aa14□□□□□ -0.17
UPK3B-203ENST00000394849 C15orf53Q8NAA6 179 aa14□□□□□ -0.17
UPK3B-203ENST00000394849 SMCO3A2RU48 225 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 TSC22D2O75157 780 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 PSG1P11464 419 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 PAX9P55771 341 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 FAM222AQ5U5X8 452 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 ACOT7LQ6ZUV0 252 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 OR51G1Q8NGK1 321 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 CLUHP3Q96NS8 147 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 MARVELD1Q9BSK0 173 aa13.99□□□□□ -0.17
UPK3B-203ENST00000394849 PRSS46E5RG02 174 aa13.98□□□□□ -0.17
UPK3B-203ENST00000394849 K7EPK0 472 aa13.98□□□□□ -0.17
UPK3B-203ENST00000394849 METTL15P1P0C7V9 234 aa13.98□□□□□ -0.17
UPK3B-203ENST00000394849 PVALBP20472 110 aaPredicted RBP13.98□□□□□ -0.17
UPK3B-203ENST00000394849 S100A10P60903 97 aa13.98□□□□□ -0.17
UPK3B-203ENST00000394849 TNP2Q05952 138 aa13.98□□□□□ -0.17
UPK3B-203ENST00000394849 TRGV9Q99603 122 aa13.98□□□□□ -0.17
UPK3B-203ENST00000394849 PBDC1Q9BVG4 233 aa13.98□□□□□ -0.17
UPK3B-203ENST00000394849 IGKV1D-37A0A075B6S9 117 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 C7orf66A4D0T2 115 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 GOSR2O14653 212 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 HTN3P15516 51 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 BCAP31P51572 246 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 ZNF90Q03938 601 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 OR2F1Q13607 317 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 USF2Q15853 346 aaPredicted RBP13.97□□□□□ -0.17
UPK3B-203ENST00000394849 TMEM14EPQ6UXP3 125 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 THAP8Q8NA92 274 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 OR10P1Q8NGE3 313 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 RNF125Q96EQ8 232 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 ATG101Q9BSB4 218 aa13.97□□□□□ -0.17
UPK3B-203ENST00000394849 IGHV3OR16-12A0A075B7B8 117 aa13.96□□□□□ -0.17
UPK3B-203ENST00000394849 CCNKO75909 580 aa13.96□□□□□ -0.17
UPK3B-203ENST00000394849 LYZP61626 148 aa13.96□□□□□ -0.17
UPK3B-203ENST00000394849 RRAS2P62070 204 aaPredicted RBP13.96□□□□□ -0.17
UPK3B-203ENST00000394849 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
UPK3B-203ENST00000394849 SIGLEC15Q6ZMC9 328 aa13.96□□□□□ -0.17
UPK3B-203ENST00000394849 C6orf223Q8N319 242 aa13.96□□□□□ -0.17
UPK3B-203ENST00000394849 MGAT4CQ9UBM8 478 aa13.96□□□□□ -0.17
UPK3B-203ENST00000394849 GOLT1BQ9Y3E0 138 aa13.96□□□□□ -0.17
UPK3B-203ENST00000394849 PMS2P5A8MQ11 134 aa13.95□□□□□ -0.18
UPK3B-203ENST00000394849 SSNA1O43805 119 aa13.95□□□□□ -0.18
UPK3B-203ENST00000394849 HBE1P02100 147 aa13.95□□□□□ -0.18
UPK3B-203ENST00000394849 NUP62P37198 522 aaPredicted RBP13.95□□□□□ -0.18
UPK3B-203ENST00000394849 CAV2P51636 162 aa13.95□□□□□ -0.18
UPK3B-203ENST00000394849 DLK1P80370 383 aa13.95□□□□□ -0.18
UPK3B-203ENST00000394849 RAB32Q13637 225 aa13.95□□□□□ -0.18
UPK3B-203ENST00000394849 SPATA31B1PQ5VZV4 182 aa13.95□□□□□ -0.18
UPK3B-203ENST00000394849 PFDN2Q9UHV9 154 aa13.95□□□□□ -0.18
UPK3B-203ENST00000394849 IGKV1OR2-108A0A075B7D4 117 aa13.94□□□□□ -0.18
UPK3B-203ENST00000394849 NBDYA0A0U1RRE5 68 aa13.94□□□□□ -0.18
UPK3B-203ENST00000394849 BUB3O43684 328 aa13.94□□□□□ -0.18
UPK3B-203ENST00000394849 SIX6O95475 246 aa13.94□□□□□ -0.18
UPK3B-203ENST00000394849 TMEM144Q7Z5S9 345 aa13.94□□□□□ -0.18
UPK3B-203ENST00000394849 SCRT2Q9NQ03 307 aa13.94□□□□□ -0.18
UPK3B-203ENST00000394849 PTTG1O95997 202 aa13.93□□□□□ -0.18
UPK3B-203ENST00000394849 CFDP00746 253 aaPredicted RBP13.93□□□□□ -0.18
UPK3B-203ENST00000394849 ID1P41134 155 aa13.93□□□□□ -0.18
UPK3B-203ENST00000394849 DAD1P61803 113 aa13.93□□□□□ -0.18
UPK3B-203ENST00000394849 FOXI2Q6ZQN5 318 aa13.93□□□□□ -0.18
UPK3B-203ENST00000394849 BPIFCQ8NFQ6 507 aa13.93□□□□□ -0.18
UPK3B-203ENST00000394849 PPP1R14BQ96C90 147 aa13.93□□□□□ -0.18
UPK3B-203ENST00000394849 SAV1Q9H4B6 383 aaPredicted RBP13.93□□□□□ -0.18
UPK3B-203ENST00000394849 YTHDF2Q9Y5A9 579 aaKnown RBP13.93□□□□□ -0.18
UPK3B-203ENST00000394849 LRP1BQ9NZR2 4599 aa13.92□□□□□ -0.18
UPK3B-203ENST00000394849 LOC102723971A0A1B0GUV8 181 aa13.92□□□□□ -0.18
UPK3B-203ENST00000394849 IL15RAQ13261 267 aa13.92□□□□□ -0.18
UPK3B-203ENST00000394849 NPVFQ9HCQ7 196 aa13.92□□□□□ -0.18
UPK3B-203ENST00000394849 FAM24AA6NFZ4 105 aa13.91□□□□□ -0.18
UPK3B-203ENST00000394849 FNDC10F2Z333 226 aa13.91□□□□□ -0.18
UPK3B-203ENST00000394849 RLN2P04090 185 aa13.91□□□□□ -0.18
UPK3B-203ENST00000394849 CYCSP99999 105 aaKnown RBP13.91□□□□□ -0.18
UPK3B-203ENST00000394849 RRN3P1Q2M238 152 aa13.91□□□□□ -0.18
UPK3B-203ENST00000394849 ZNF709Q8N972 641 aa13.91□□□□□ -0.18
UPK3B-203ENST00000394849 NMES1Q9C002 83 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms