RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SRSF12Q8WXF0 261 aaKnown RBP5.5□□□□□ -1.53
RTN4-205ENST00000394609 C1orf159Q96HA4 380 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 FAM103A1Q9BTL3 118 aaKnown RBP5.5□□□□□ -1.53
RTN4-205ENST00000394609 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 IL36BQ9NZH7 164 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 WDR83OSQ9Y284 106 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 LAMTOR2Q9Y2Q5 125 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 HECTD1Q9ULT8 2610 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 NBPF19A0A087WUL8 3843 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 CREBBPQ92793 2442 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 NAV3Q8IVL0 2385 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 A0A096LNT2 108 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 TEX22C9J3V5 150 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 HMGB3O15347 200 aaKnown RBP5.49□□□□□ -1.53
RTN4-205ENST00000394609 TCF21O43680 179 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 PAGE4O60829 102 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 ZNF253O75346 499 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 GPX1P07203 203 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 FAM106CPP0CH98 169 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 IGLC2P0DOY2 106 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 IGLC3P0DOY3 106 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 TMEM11P17152 192 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 CDC34P49427 236 aaPredicted RBP5.49□□□□□ -1.53
RTN4-205ENST00000394609 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 SUMO1P63165 101 aaKnown RBP5.49□□□□□ -1.53
RTN4-205ENST00000394609 SMIM15Q7Z3B0 74 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 NPBQ8NG41 125 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 OR2T6Q8NHC8 308 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 C11orf52Q96A22 123 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 MGST2Q99735 147 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 HSPB9Q9BQS6 159 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 NPVFQ9HCQ7 196 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 BEX4Q9NWD9 120 aaPredicted RBP5.49□□□□□ -1.53
RTN4-205ENST00000394609 MRPL27Q9P0M9 148 aaKnown RBP5.49□□□□□ -1.53
RTN4-205ENST00000394609 COX11Q9Y6N1 276 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 CSPG4Q6UVK1 2322 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 IGHV3-21A0A0B4J1V1 117 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 INS-IGF2F8WCM5 200 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 NUPR1O60356 82 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 SERF1AO75920 110 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 NDUFA3O95167 84 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 TGFAP01135 160 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 OR5G3P0C626 314 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 NPPCP23582 126 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 OPRK1P41145 380 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 SUB1P53999 127 aaKnown RBP eCLIP5.49□□□□□ -1.537e-16■■■□□ 18.3
RTN4-205ENST00000394609 MFAP2P55001 183 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 LINC00310P59036 64 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 CX3CL1P78423 397 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 FXYD3Q14802 87 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 C21orf62-AS1Q17RA5 79 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 CST9LP1Q5W188 147 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 MIC13Q5XKP0 118 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 RASL11AQ6T310 242 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 TEPPQ6URK8 271 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 Q8N6K4 173 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 OR10G8Q8NGN5 311 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 GGTLC1Q9BX51 225 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 FNDC4Q9H6D8 234 aaPredicted RBP5.49□□□□□ -1.53
RTN4-205ENST00000394609 TP53TG3Q9ULZ0 132 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 LSM4Q9Y4Z0 139 aaKnown RBP5.49□□□□□ -1.53
RTN4-205ENST00000394609 UNC79Q9P2D8 2635 aa5.49□□□□□ -1.53
RTN4-205ENST00000394609 PRRC2AP48634 2157 aaKnown RBP5.48□□□□□ -1.53
RTN4-205ENST00000394609 IGKV1OR2-108A0A075B7D4 117 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 TRAV30A0A087WSZ9 112 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 SH2D7A6NKC9 451 aaPredicted RBP5.48□□□□□ -1.53
RTN4-205ENST00000394609 DIRC3C9JPN6 131 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 HNRNPA3P51991 378 aaKnown RBP5.48□□□□□ -1.53
RTN4-205ENST00000394609 ATP5IP56385 69 aaPredicted RBP5.48□□□□□ -1.53
RTN4-205ENST00000394609 RHOBP62745 196 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 CD69Q07108 199 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 EBI3Q14213 229 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 KLF17Q5JT82 389 aaPredicted RBP5.48□□□□□ -1.53
RTN4-205ENST00000394609 TMEM219Q86XT9 240 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 Q8N976 141 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 VN1R17PQ8TDU5 208 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 Q96MF0 132 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 SAMD10Q9BYL1 202 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 SLC25A22Q9H936 323 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 MRPL36Q9P0J6 103 aaKnown RBP5.48□□□□□ -1.53
RTN4-205ENST00000394609 PAM16Q9Y3D7 125 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 ITPR2Q14571 2701 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 NOTCH2Q04721 2471 aa5.48□□□□□ -1.53
RTN4-205ENST00000394609 CCL25O15444 150 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 HYPMO75409 117 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 MT-CO2P00403 227 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 GATA2P23769 480 aaPredicted RBP5.47□□□□□ -1.53
RTN4-205ENST00000394609 RHOGP84095 191 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 NDPQ00604 133 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 LOXL1Q08397 574 aaPredicted RBP5.47□□□□□ -1.53
RTN4-205ENST00000394609 RAB31Q13636 194 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 SPATA45Q537H7 98 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 ZNF562Q6V9R5 426 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 BAGE3Q86Y29 109 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 BAGE2Q86Y30 109 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 CACNG8Q8WXS5 425 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 NPIPB3Q92617 1050 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 KCNS1Q96KK3 526 aa5.47□□□□□ -1.53
RTN4-205ENST00000394609 SLC25A33Q9BSK2 321 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms