RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 GOLT1AQ6ZVE7 132 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 GPR82Q96P67 336 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 MCRIP2Q9BUT9 160 aaKnown RBP10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 A0A1B0GXF2 115 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 IGKV1-17P01599 117 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 PRRX1P54821 245 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 ARF6P62330 175 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 Q56UQ5 140 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 PVRIGQ6DKI7 326 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 Q6ZVH6 145 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 PRNTQ86SH4 94 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 OR8B3Q8NGG8 313 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 RPEQ96AT9 228 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 OR8B2Q96RD0 313 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 FLNCQ14315 2725 aa10.67□□□□□ -0.7
GTF2F1-201ENST00000394456 I3L2K1 104 aa10.66□□□□□ -0.7
GTF2F1-201ENST00000394456 C11orf71Q6IPW1 123 aa10.66□□□□□ -0.7
GTF2F1-201ENST00000394456 SLC25A39Q9BZJ4 359 aaPredicted RBP10.66□□□□□ -0.7
GTF2F1-201ENST00000394456 RPP21Q9H633 154 aaKnown RBP10.66□□□□□ -0.7
GTF2F1-201ENST00000394456 HIST1H1EP10412 219 aaKnown RBP10.66□□□□□ -0.7
GTF2F1-201ENST00000394456 C8orf46Q8TAG6 207 aa10.66□□□□□ -0.7
GTF2F1-201ENST00000394456 WIPF2Q8TF74 440 aaPredicted RBP10.66□□□□□ -0.7
GTF2F1-201ENST00000394456 HIGD1AQ9Y241 93 aa10.66□□□□□ -0.7
GTF2F1-201ENST00000394456 M0R2Z0 102 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 NDUFS7O75251 213 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 HSBP1O75506 76 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 CNIH1O95406 144 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 LTAP01374 205 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 IGLV2-11P01706 119 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 NPSP0C0P6 89 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 GNLYP22749 145 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 CELSR1Q9NYQ6 3014 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 C19orf71A6NCJ1 209 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 TOMM40O96008 361 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 IGHV3-23P01764 117 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 C5orf17Q8NAS9 161 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 PRSS22Q9GZN4 317 aa10.65□□□□□ -0.7
GTF2F1-201ENST00000394456 FAM181BA6NEQ2 426 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 K7EIM0 57 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 M0R3E3 92 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 P01737 135 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 ZNF124Q15973 351 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 TMEM208Q9BTX3 173 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 IGLC2P0DOY2 106 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 IGLC3P0DOY3 106 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 SFTPCP11686 197 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 Q86TA4 180 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 C22orf15Q8WYQ4 148 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 TIMD4Q96H15 378 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 LPAR2Q9HBW0 351 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 IGHV3OR16-8A0A075B7F1 116 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 LY6LH3BQJ8 138 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 OVOL3O00110 214 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 STPG4Q8N801 248 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 OR4B1Q8NGF8 309 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 BORCS7Q96B45 105 aa10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 TIMM8BQ9Y5J9 83 aaPredicted RBP10.64□□□□□ -0.71
GTF2F1-201ENST00000394456 VPS13CQ709C8 3753 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 C19orf84I3L1E1 186 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 COX19Q49B96 90 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 FAM120AOSQ5T036 256 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 UBTD1Q9HAC8 227 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 LIPFP07098 398 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 HBBP68871 147 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 Q6ZN92 141 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 ITLN2Q8WWU7 325 aaPredicted RBP10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 ZC2HC1AQ96GY0 325 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 RASL11BQ9BPW5 248 aa10.63□□□□□ -0.71
GTF2F1-201ENST00000394456 MUC21A0A0G2JKD1 596 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 MUC21A0A140T8X8 626 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 OR2J3O76001 311 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 MUC21Q5SSG8 566 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 DYNAPQ8N1N2 210 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 STXBP6Q8NFX7 210 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 TNFRSF14Q92956 283 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 MRPL27Q9P0M9 148 aaKnown RBP10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 CSN3P07498 182 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 KLF5Q13887 457 aaPredicted RBP10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 FMC1Q96HJ9 113 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 TXN2Q99757 166 aa10.62□□□□□ -0.71
GTF2F1-201ENST00000394456 UTP20O75691 2785 aaKnown RBP10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 IGHV3-35A0A0C4DH35 117 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 COL8A1P27658 744 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 PLP1P60201 277 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 IGFL4Q6B9Z1 124 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 NEU4Q8WWR8 484 aaPredicted RBP10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 IL4P05112 153 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 IGLL1P15814 213 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 NDPQ00604 133 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 HES1Q14469 280 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 LY6G5BQ8NDX9 201 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 PMCHL2Q9BQD1 86 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 TPPP3Q9BW30 176 aa10.61□□□□□ -0.71
GTF2F1-201ENST00000394456 A8MWL6 223 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 H0Y8G0 127 aa10.6□□□□□ -0.71
GTF2F1-201ENST00000394456 ARMS2P0C7Q2 107 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms