RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 WIPF2Q8TF74 440 aaPredicted RBP15.61■□□□□ 0.09
HDDC3-202ENST00000394272 OR5B12Q96R08 314 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 CYSRT1A8MQ03 144 aa15.6■□□□□ 0.09
HDDC3-202ENST00000394272 F6UZH7 168 aa15.6■□□□□ 0.09
HDDC3-202ENST00000394272 GGCTO75223 188 aaKnown RBP15.6■□□□□ 0.09
HDDC3-202ENST00000394272 SNRPCP09234 159 aaKnown RBP15.6■□□□□ 0.09
HDDC3-202ENST00000394272 IGLC2P0DOY2 106 aa15.6■□□□□ 0.09
HDDC3-202ENST00000394272 HIST1H1EP10412 219 aaKnown RBP15.6■□□□□ 0.09
HDDC3-202ENST00000394272 S100A7P31151 101 aa15.6■□□□□ 0.09
HDDC3-202ENST00000394272 C16orf95Q9H693 158 aa15.6■□□□□ 0.09
HDDC3-202ENST00000394272 RNF24Q9Y225 148 aa15.6■□□□□ 0.09
HDDC3-202ENST00000394272 H3BQ15 152 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 UNQ9165/PRO28630Q6UXU0 137 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 ZNF586Q9NXT0 402 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 BUB3O43684 328 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 LGALS1P09382 135 aaKnown RBP15.59■□□□□ 0.09
HDDC3-202ENST00000394272 CRYBB3P26998 211 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 ATRAIDQ6UW56 229 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 BLNKQ8WV28 456 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 METTL26Q96S19 204 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 NKX6-2Q9C056 277 aaPredicted RBP15.59■□□□□ 0.09
HDDC3-202ENST00000394272 U3KQE9 123 aa15.59■□□□□ 0.09
HDDC3-202ENST00000394272 SCO2A0A1W2PP80 73 aa15.58■□□□□ 0.08
HDDC3-202ENST00000394272 MYCNOSP40205 109 aa15.58■□□□□ 0.08
HDDC3-202ENST00000394272 TCTEX1D4Q5JR98 221 aa15.58■□□□□ 0.08
HDDC3-202ENST00000394272 C11orf52Q96A22 123 aa15.58■□□□□ 0.08
HDDC3-202ENST00000394272 C20orf24Q9BUV8 137 aa15.58■□□□□ 0.08
HDDC3-202ENST00000394272 PARLQ9H300 379 aa15.58■□□□□ 0.08
HDDC3-202ENST00000394272 SUMO1P63165 101 aaKnown RBP15.57■□□□□ 0.08
HDDC3-202ENST00000394272 OR4F17Q8NGA8 305 aa15.57■□□□□ 0.08
HDDC3-202ENST00000394272 LINC01006Q8NI28 216 aa15.57■□□□□ 0.08
HDDC3-202ENST00000394272 TMEM190Q8WZ59 177 aa15.57■□□□□ 0.08
HDDC3-202ENST00000394272 RPUSD4Q96CM3 377 aaKnown RBP15.57■□□□□ 0.08
HDDC3-202ENST00000394272 CRLF1O75462 422 aa15.57■□□□□ 0.08
HDDC3-202ENST00000394272 RPL7P18124 248 aaKnown RBP15.57■□□□□ 0.08
HDDC3-202ENST00000394272 ELOVL1Q9BW60 279 aa15.57■□□□□ 0.08
HDDC3-202ENST00000394272 ZNF207O43670 478 aaKnown RBP15.56■□□□□ 0.08
HDDC3-202ENST00000394272 NDUFB4O95168 129 aa15.56■□□□□ 0.08
HDDC3-202ENST00000394272 SNAPINO95295 136 aa15.56■□□□□ 0.08
HDDC3-202ENST00000394272 RANP62826 216 aaKnown RBP15.56■□□□□ 0.08
HDDC3-202ENST00000394272 OR8I2Q8N0Y5 310 aa15.56■□□□□ 0.08
HDDC3-202ENST00000394272 TRBV19A0A075B6N1 114 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 ZNF727A8MUV8 499 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 H3BTX0 84 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 SCO1O75880 301 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 NDUFA7O95182 113 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 APOHP02749 345 aaPredicted RBP15.55■□□□□ 0.08
HDDC3-202ENST00000394272 CDX1P47902 265 aaPredicted RBP15.55■□□□□ 0.08
HDDC3-202ENST00000394272 FAM74A3Q4VXF1 159 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 GPHB5Q86YW7 130 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 CLRN3Q8NCR9 226 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 SMIM7Q9BQ49 75 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 NIPSNAP3BQ9BS92 247 aa15.55■□□□□ 0.08
HDDC3-202ENST00000394272 C1orf194Q5T5A4 169 aa15.54■□□□□ 0.08
HDDC3-202ENST00000394272 C17orf77Q96MU5 243 aa15.54■□□□□ 0.08
HDDC3-202ENST00000394272 DERL1Q9BUN8 251 aa15.54■□□□□ 0.08
HDDC3-202ENST00000394272 TCF21O43680 179 aa15.54■□□□□ 0.08
HDDC3-202ENST00000394272 ZNF674Q2M3X9 581 aa15.54■□□□□ 0.08
HDDC3-202ENST00000394272 Q9H3A6 140 aa15.54■□□□□ 0.08
HDDC3-202ENST00000394272 SMAD5-AS1Q9Y6J3 95 aa15.54■□□□□ 0.08
HDDC3-202ENST00000394272 TCEAL7Q9BRU2 100 aa15.53■□□□□ 0.08
HDDC3-202ENST00000394272 PDE6HQ13956 83 aa15.52■□□□□ 0.08
HDDC3-202ENST00000394272 C18orf65Q6ZTR6 163 aa15.52■□□□□ 0.08
HDDC3-202ENST00000394272 C2CD4CQ8TF44 421 aa15.52■□□□□ 0.08
HDDC3-202ENST00000394272 TVP23CQ96ET8 276 aa15.52■□□□□ 0.08
HDDC3-202ENST00000394272 GPR82Q96P67 336 aa15.52■□□□□ 0.08
HDDC3-202ENST00000394272 IGHV4OR15-8A0A075B7B6 117 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 IGHV3OR16-13A0A075B7E8 117 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 A0A087WW49 117 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 IGHV3-49A0A0A0MS15 119 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 IGHV3-74A0A0B4J1X5 117 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 IGHV3-66A0A0C4DH42 116 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 ZNF320A2RRD8 509 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 PGPA6NDG6 321 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 RPEL1Q2QD12 228 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 FAM106AQ4KMX7 169 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 AWAT1Q58HT5 328 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 SIGLEC15Q6ZMC9 328 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 SDF2L1Q9HCN8 221 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 OTORQ9NRC9 128 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 NAT8Q9UHE5 227 aa15.52■□□□□ 0.07
HDDC3-202ENST00000394272 SETD2Q9BYW2 2564 aaPredicted RBP15.52■□□□□ 0.07
HDDC3-202ENST00000394272 SLC17A3O00476 420 aa15.51■□□□□ 0.07
HDDC3-202ENST00000394272 LYPD1Q8N2G4 141 aa15.51■□□□□ 0.07
HDDC3-202ENST00000394272 C4orf3Q8WVX3 66 aa15.51■□□□□ 0.07
HDDC3-202ENST00000394272 DAZ1Q9NQZ3 744 aaKnown RBP15.51■□□□□ 0.07
HDDC3-202ENST00000394272 K7EMT4 169 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 M0R036 132 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 C16orf54Q6UWD8 224 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 WFDC12Q8WWY7 111 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 TRBV20OR9-2A0A075B6H5 130 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 A0A087X0K7 114 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 PNRC1Q12796 327 aaPredicted RBP15.5■□□□□ 0.07
HDDC3-202ENST00000394272 TMEM241Q24JQ0 296 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 EXOC3-AS1Q8N2X6 119 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 C5orf17Q8NAS9 161 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 GLMPQ8WWB7 406 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 HIST1H2BAQ96A08 127 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 EPDR1Q9UM22 224 aa15.5■□□□□ 0.07
HDDC3-202ENST00000394272 PEX7O00628 323 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms