RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 OR10G9Q8NGN4 311 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 OR10G7Q8NGN6 311 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 OR5R1Q8NH85 324 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 LYPD6BQ8NI32 183 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 TMPRSS5Q9H3S3 457 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 SS18L2Q9UHA2 77 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 NF1P21359 2839 aa4.63□□□□□ -1.67
CASC3-202ENST00000394114 IGKV1OR2-108A0A075B7D4 117 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 TMEM218A2RU14 115 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 ZFP92A6NM28 416 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 K7EP13 123 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 MSMBP08118 114 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 SFTA3P0C7M3 94 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 RAB9AP51151 201 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 MFAP2P55001 183 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 SERF2P84101 59 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 PAX8Q06710 450 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 GUCA2BQ16661 112 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 LINC01620Q4KN68 170 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 C2orf83Q53S99 150 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 PYY3Q5JQD4 70 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 KLF17Q5JT82 389 aaPredicted RBP4.62□□□□□ -1.67
CASC3-202ENST00000394114 OR2T10Q8NGZ9 312 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 GGTLC1Q9BX51 225 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 FNDC4Q9H6D8 234 aaPredicted RBP4.62□□□□□ -1.67
CASC3-202ENST00000394114 NPVFQ9HCQ7 196 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 MRPL36Q9P0J6 103 aaKnown RBP4.62□□□□□ -1.67
CASC3-202ENST00000394114 GNG13Q9P2W3 67 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 PXMP4Q9Y6I8 212 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 JMJD1CQ15652 2540 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 NIPBLQ6KC79 2804 aaeCLIP4.62□□□□□ -1.67
CASC3-202ENST00000394114 MAP1LC3B2A6NCE7 125 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 C17orf112F2Z3M2 114 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 MDKP21741 143 aaPredicted RBP4.62□□□□□ -1.67
CASC3-202ENST00000394114 RAB5BP61020 215 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 BSXQ3C1V8 233 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 MINOS1Q5TGZ0 78 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 TMEM219Q86XT9 240 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 NDUFAF3Q9BU61 184 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 MAP1LC3BQ9GZQ8 125 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 SLC39A9Q9NUM3 307 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 SMPXQ9UHP9 88 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 TIMM9Q9Y5J7 89 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 MINOS1-NBL1R4GNA1 71 aa4.62□□□□□ -1.67
CASC3-202ENST00000394114 AKAP9Q99996 3911 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 YIF1AO95070 293 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 OR10J1P30954 320 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 NDPQ00604 133 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 FXYD3Q14802 87 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 ZNF562Q6V9R5 426 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 RXFP4Q8TDU9 374 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 MALSU1Q96EH3 234 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 SMIM12Q96EX1 92 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 SCRT1Q9BWW7 348 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 S4R3C0 116 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 IGHV1-69DA0A0B4J2H0 117 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 C20orf202A1L168 122 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 RBFOX3A6NFN3 312 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 NPIPB6E9PJ23 425 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 IGHV1-69P01742 117 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 HIST1H1BP16401 226 aaKnown RBP4.61□□□□□ -1.67
CASC3-202ENST00000394114 RND2P52198 227 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 SUB1P53999 127 aaKnown RBP eCLIP4.61□□□□□ -1.67
CASC3-202ENST00000394114 SLURP1P55000 103 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 COX19Q49B96 90 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 ASPHD1Q5U4P2 390 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 GATAD1Q8WUU5 269 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 SLC35E1Q96K37 410 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 DUX5Q96PT3 197 aa4.61□□□□□ -1.67
CASC3-202ENST00000394114 NKX6-2Q9C056 277 aaPredicted RBP4.61□□□□□ -1.67
CASC3-202ENST00000394114 B4DSR2 109 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 M0R036 132 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 M0R143 59 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 GNG7O60262 68 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 FAM106CPP0CH98 169 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 BRS3P32247 399 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 CX3CL1P78423 397 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 ZNF90Q03938 601 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 LY6EQ16553 131 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 DEFB113Q30KQ7 82 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 ACOT6Q3I5F7 207 aaPredicted RBP4.6□□□□□ -1.67
CASC3-202ENST00000394114 C5orf47Q569G3 176 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 SAMD13Q5VXD3 122 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 SPATA31B1PQ5VZV4 182 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 DPPA3Q6W0C5 159 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 SMIM20Q8N5G0 67 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 LFNGQ8NES3 379 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 NPBQ8NG41 125 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 OR4C5Q8NGB2 326 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 RNF5Q99942 180 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 SLC25A33Q9BSK2 321 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 DOK5Q9P104 306 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 CTXND1A0A1B0GTU2 59 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 OOSP1A8MZH6 123 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 MPDU1O75352 247 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 NDUFA3O95167 84 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 MT-CO2P00403 227 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 HBE1P02100 147 aa4.6□□□□□ -1.67
CASC3-202ENST00000394114 SLC25A16P16260 332 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms