RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 IGLL1P15814 213 aa9.96□□□□□ -0.82
USP44-202ENST00000393091 PDE6HQ13956 83 aa9.96□□□□□ -0.82
USP44-202ENST00000393091 LINC00305Q7Z4B0 112 aa9.96□□□□□ -0.82
USP44-202ENST00000393091 STAB1Q9NY15 2570 aa9.96□□□□□ -0.82
USP44-202ENST00000393091 RPL7P18124 248 aaKnown RBP9.96□□□□□ -0.82
USP44-202ENST00000393091 RHOBP62745 196 aa9.96□□□□□ -0.82
USP44-202ENST00000393091 SLC25A32Q9H2D1 315 aa9.96□□□□□ -0.82
USP44-202ENST00000393091 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
USP44-202ENST00000393091 ARL2-SNX15V9GYD0 113 aa9.96□□□□□ -0.82
USP44-202ENST00000393091 PFDN1O60925 122 aa9.95□□□□□ -0.82
USP44-202ENST00000393091 SAP30O75446 220 aa9.95□□□□□ -0.82
USP44-202ENST00000393091 SIGLEC15Q6ZMC9 328 aa9.95□□□□□ -0.82
USP44-202ENST00000393091 MBD3L1Q8WWY6 194 aa9.95□□□□□ -0.82
USP44-202ENST00000393091 TRAV1-1A0A0B4J248 108 aa9.95□□□□□ -0.82
USP44-202ENST00000393091 K7EQG2 157 aa9.95□□□□□ -0.82
USP44-202ENST00000393091 CD300EQ496F6 205 aaPredicted RBP9.95□□□□□ -0.82
USP44-202ENST00000393091 EIF5AL1Q6IS14 154 aaKnown RBP9.95□□□□□ -0.82
USP44-202ENST00000393091 SH3BGRL3Q9H299 93 aa9.95□□□□□ -0.82
USP44-202ENST00000393091 A8MTW9 85 aa9.94□□□□□ -0.82
USP44-202ENST00000393091 NDUFS6O75380 124 aaKnown RBP9.94□□□□□ -0.82
USP44-202ENST00000393091 KHDC3LQ587J8 217 aa9.94□□□□□ -0.82
USP44-202ENST00000393091 MRPL53Q96EL3 112 aaKnown RBP9.94□□□□□ -0.82
USP44-202ENST00000393091 C20orf24Q9BUV8 137 aa9.94□□□□□ -0.82
USP44-202ENST00000393091 HRH4Q9H3N8 390 aa9.94□□□□□ -0.82
USP44-202ENST00000393091 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
USP44-202ENST00000393091 STAG3L2P0CL84 134 aa9.94□□□□□ -0.82
USP44-202ENST00000393091 STAG3L3P0CL85 134 aa9.94□□□□□ -0.82
USP44-202ENST00000393091 SULT1A2P50226 295 aa9.94□□□□□ -0.82
USP44-202ENST00000393091 RPP25LQ8N5L8 163 aaKnown RBP9.94□□□□□ -0.82
USP44-202ENST00000393091 SAT2Q96F10 170 aaPredicted RBP9.94□□□□□ -0.82
USP44-202ENST00000393091 ORM2P19652 201 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 PSMB3P49720 205 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 TCF24Q7RTU0 167 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 LYPD1Q8N2G4 141 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 IGHV3-35A0A0C4DH35 117 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 GALR1P47211 349 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 BPIFA4PQ86YQ2 179 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 TMEM61Q8N0U2 210 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 ZNF503Q96F45 646 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 SCRT1Q9BWW7 348 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 TAS2R45P59539 299 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 PQLC2Q6ZP29 291 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 LYPD6BQ8NI32 183 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 DYNLRB2Q8TF09 96 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 NRN1Q9NPD7 142 aa9.93□□□□□ -0.82
USP44-202ENST00000393091 KRTAP10-11P60412 298 aa9.92□□□□□ -0.82
USP44-202ENST00000393091 MORN5Q5VZ52 161 aa9.92□□□□□ -0.82
USP44-202ENST00000393091 HSD17B11Q8NBQ5 300 aa9.92□□□□□ -0.82
USP44-202ENST00000393091 ZNF471Q9BX82 626 aaPredicted RBP9.92□□□□□ -0.82
USP44-202ENST00000393091 MS4A6AQ9H2W1 248 aa9.92□□□□□ -0.82
USP44-202ENST00000393091 CTXND1A0A1B0GTU2 59 aa9.92□□□□□ -0.82
USP44-202ENST00000393091 ZNF726P1Q15940 193 aa9.92□□□□□ -0.82
USP44-202ENST00000393091 SPATA31B1PQ5VZV4 182 aa9.92□□□□□ -0.82
USP44-202ENST00000393091 RPRMQ9NS64 109 aa9.92□□□□□ -0.82
USP44-202ENST00000393091 OR4C46A6NHA9 309 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 HIST1H1EP10412 219 aaKnown RBP9.91□□□□□ -0.82
USP44-202ENST00000393091 RAB2AP61019 212 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 FXYD5Q96DB9 178 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 SLC50A1Q9BRV3 221 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 PBDC1Q9BVG4 233 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 ACTR3CQ9C0K3 210 aaPredicted RBP9.91□□□□□ -0.82
USP44-202ENST00000393091 ISLRO14498 428 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 GCSAMLQ5JQS6 135 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 LCN15Q6UWW0 184 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 MIR17HGQ75NE6 70 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 Q8N1Y9 231 aa9.91□□□□□ -0.82
USP44-202ENST00000393091 IZUMO1RA6ND01 250 aa9.9□□□□□ -0.82
USP44-202ENST00000393091 ZNF207O43670 478 aaKnown RBP9.9□□□□□ -0.82
USP44-202ENST00000393091 PAFAH1B2P68402 229 aa9.9□□□□□ -0.82
USP44-202ENST00000393091 FAM78BQ5VT40 261 aa9.9□□□□□ -0.82
USP44-202ENST00000393091 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
USP44-202ENST00000393091 LRRC20Q8TCA0 184 aa9.9□□□□□ -0.82
USP44-202ENST00000393091 PRELID1Q9Y255 219 aa9.9□□□□□ -0.82
USP44-202ENST00000393091 RFNGQ9Y644 331 aa9.9□□□□□ -0.82
USP44-202ENST00000393091 TRBV19A0A075B6N1 114 aa9.9□□□□□ -0.82
USP44-202ENST00000393091 CDC34P49427 236 aaPredicted RBP9.9□□□□□ -0.82
USP44-202ENST00000393091 UHRF2Q96PU4 802 aa9.9□□□□□ -0.82
USP44-202ENST00000393091 G3V4G9 280 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 CXorf1O96002 111 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 OR51M1Q9H341 326 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 TRAV8-2A0A0B4J237 113 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 AKR1C8PQ5T2L2 129 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 RBPMS2Q6ZRY4 209 aaKnown RBP9.89□□□□□ -0.83
USP44-202ENST00000393091 TCEAL7Q9BRU2 100 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 FHITP49789 147 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 PSG9Q00887 426 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 OR8I2Q8N0Y5 310 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 RAB24Q969Q5 203 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 ZNF331Q9NQX6 463 aaPredicted RBP9.89□□□□□ -0.83
USP44-202ENST00000393091 PPP1R14DQ9NXH3 145 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 ZNF586Q9NXT0 402 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 DOK5Q9P104 306 aa9.89□□□□□ -0.83
USP44-202ENST00000393091 PKD1L1Q8TDX9 2849 aa9.88□□□□□ -0.83
USP44-202ENST00000393091 BOLA2-SMG1P6H3BVE0 249 aa9.88□□□□□ -0.83
USP44-202ENST00000393091 OXLD1Q5BKU9 147 aa9.88□□□□□ -0.83
USP44-202ENST00000393091 IGHV3OR16-8A0A075B7F1 116 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms