RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 HIGD1BQ9P298 99 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 ZGRF1Q86YA3 2104 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 IGKV1-27A0A075B6S5 117 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 CENPVL3A0A0U1RRI6 287 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 A0A1W2PPI3 338 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 C15orf62A8K5M9 175 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 KIR2DS2P43631 304 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 LINC00596Q86U02 117 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 DDB2Q92466 427 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 NRGNQ92686 78 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 DKK2Q9UBU2 259 aa6.23□□□□□ -1.41
VTI1A-201ENST00000393077 KIAA1671Q9BY89 1806 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 H3BTX0 84 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 IGHV3-13P01766 116 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 SRSF1Q07955 248 aaKnown RBP eCLIP6.22□□□□□ -1.41
VTI1A-201ENST00000393077 C2orf83Q53S99 150 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 IGF2-ASQ6U949 168 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 SLC25A48Q6ZT89 311 aaKnown RBP6.22□□□□□ -1.41
VTI1A-201ENST00000393077 VKORC1L1Q8N0U8 176 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 NTN5Q8WTR8 489 aaPredicted RBP6.22□□□□□ -1.41
VTI1A-201ENST00000393077 LINC00312Q9Y6C7 94 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 CHD7Q9P2D1 2997 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 ZNF815PA8K554 130 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 NCR2O95944 276 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 LTAP01374 205 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 TRACP01848 142 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 LINC00694P0DN24 101 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 PYYP10082 97 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 SRSF2Q01130 221 aaKnown RBP6.22□□□□□ -1.41
VTI1A-201ENST00000393077 MOB3BQ86TA1 216 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 OR11H6Q8NGC7 330 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 Q8TCH9 128 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 UCN2Q96RP3 112 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 NXT2Q9NPJ8 142 aaKnown RBP6.22□□□□□ -1.41
VTI1A-201ENST00000393077 C5orf42Q9H799 3197 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 PCNX3Q9H6A9 2034 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 MYMXA0A1B0GTQ4 84 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 C21orf140B9A014 251 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 CFHR1Q03591 330 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 Q8IYB0 196 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 ANKRD29Q8N6D5 301 aa6.22□□□□□ -1.41
VTI1A-201ENST00000393077 KLK10O43240 276 aa6.21□□□□□ -1.41
VTI1A-201ENST00000393077 CCL3P10147 92 aa6.21□□□□□ -1.41
VTI1A-201ENST00000393077 CD40P25942 277 aa6.21□□□□□ -1.41
VTI1A-201ENST00000393077 TRIP6Q15654 476 aaKnown RBP6.21□□□□□ -1.41
VTI1A-201ENST00000393077 SPINK14Q6IE38 97 aa6.21□□□□□ -1.41
VTI1A-201ENST00000393077 C8orf46Q8TAG6 207 aa6.21□□□□□ -1.41
VTI1A-201ENST00000393077 NCOA6Q14686 2063 aaPredicted RBP6.21□□□□□ -1.42
VTI1A-201ENST00000393077 A0A096LPE4 126 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 A0A1W2PPZ6 126 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 FAM27BQ5VT28 67 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 MORN3Q6PF18 240 aaPredicted RBP6.21□□□□□ -1.42
VTI1A-201ENST00000393077 NABP1Q96AH0 204 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 CHCHD5Q9BSY4 110 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 KLK15Q9H2R5 256 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 ZNF474Q6S9Z5 364 aaPredicted RBP6.21□□□□□ -1.42
VTI1A-201ENST00000393077 C2orf82Q6UX34 121 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 GOLT1AQ6ZVE7 132 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 THADAQ6YHU6 1953 aa6.21□□□□□ -1.42
VTI1A-201ENST00000393077 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 TRAV40A0A0B4J280 105 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 IGKV1-6A0A0C4DH72 117 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 MGST3O14880 152 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 NPYP01303 97 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 Q6ZS49 121 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 CDIP1Q9H305 208 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 PRR19A6NJB7 356 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 ARFGEF3Q5TH69 2177 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 ASCL5Q7RTU5 278 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 FAM57AQ8TBR7 257 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 FMC1Q96HJ9 113 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 VWC2LB2RUY7 222 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 H3BMM0 161 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 IGKV3-11P04433 115 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 MPV17P39210 176 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 DSCR4P56555 118 aaPredicted RBP6.2□□□□□ -1.42
VTI1A-201ENST00000393077 FAM19A5Q7Z5A7 132 aaPredicted RBP6.2□□□□□ -1.42
VTI1A-201ENST00000393077 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
VTI1A-201ENST00000393077 E9PLN8 166 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 DLL1O00548 723 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 ORM1P02763 201 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 HERVK_113P63121 156 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 IGLV3-21P80748 117 aaPredicted RBP6.19□□□□□ -1.42
VTI1A-201ENST00000393077 HOXA4Q00056 320 aaPredicted RBP6.19□□□□□ -1.42
VTI1A-201ENST00000393077 DEFB109BQ30KR1 87 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 GDF5OSQ5U4N7 250 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 Q6ZR03 302 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 OR13A1Q8NGR1 328 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 PRNDQ9UKY0 176 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 PROCRQ9UNN8 238 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 PKIGQ9Y2B9 76 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 MUC6Q6W4X9 2439 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 COL6A6A6NMZ7 2263 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 PRSS2P07478 247 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 TMEM105Q8N8V8 129 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 DSCAML1Q8TD84 2053 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 NPIPB11E5RHQ5 1161 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 TMEM170BQ5T4T1 132 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms