RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 LEPROTL1O95214 131 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 IGKV1D-12P01611 117 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 SCTP09683 121 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 FGF6P10767 208 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 ODF1Q14990 250 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 MOB1BQ7L9L4 216 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 TTC9CQ8N5M4 171 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 GCSAMQ8N6F7 178 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 MTCH1Q9NZJ7 389 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 WDR83OSQ9Y284 106 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 YTHDF2Q9Y5A9 579 aaKnown RBP9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 TMEM89A2RUT3 159 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 TNFRSF13BO14836 293 aaPredicted RBP9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 ARL14EPLP0DKL9 152 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 ZNF32P17041 273 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 LINC01545Q5VT33 79 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 SPATA31B1PQ5VZV4 182 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 OR4X2Q8NGF9 303 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 OR9G4Q8NGQ1 327 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 NABP1Q96AH0 204 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 SPAG8Q99932 426 aaPredicted RBP9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 VGLL1Q99990 258 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 MAP1LC3CQ9BXW4 147 aa9.17□□□□□ -0.94
TRAF3IP2-208ENST00000392556 MPDU1O75352 247 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 FOXH1O75593 365 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 CLEC3BP05452 202 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 AESQ08117 197 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 OR2H1Q9GZK4 316 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 CYSLTR1Q9Y271 337 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 IGHV1-24A0A0C4DH33 117 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 IGKV1-6A0A0C4DH72 117 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 C5orf49A4QMS7 147 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 IGHV1-46P01743 117 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 CDAP32320 146 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 OPRK1P41145 380 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 FOXE3Q13461 319 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 OR51H1Q8NH63 302 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 KLF14Q8TD94 323 aaPredicted RBP9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 BORCS8Q96FH0 119 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 RAX2Q96IS3 184 aa9.16□□□□□ -0.94
TRAF3IP2-208ENST00000392556 HELTA6NFD8 242 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 DEFA4P12838 97 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 TNFRSF1AP19438 455 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 GCHFRP30047 84 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 ALKBH6Q3KRA9 238 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 TIGITQ495A1 244 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 TMEM155Q4W5P6 130 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 CENPWQ5EE01 88 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 C8orf86Q6ZUL3 223 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 TEX45Q8NA69 505 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 LRRC29Q8WV35 223 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 RNF183Q96D59 192 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 RABAC1Q9UI14 185 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 DOCK11Q5JSL3 2073 aa9.15□□□□□ -0.94
TRAF3IP2-208ENST00000392556 hADV38S2A0JD32 116 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 RRHO14718 337 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 WNT9BO14905 357 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 BRI3O95415 125 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 TCL1AP56279 114 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 RPL8P62917 257 aaKnown RBP9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 SLC35B1P78383 322 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 SRSF2Q01130 221 aaKnown RBP9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 TMEM42Q69YG0 159 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 TEPPQ6URK8 271 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 BOD1L2Q8IYS8 172 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 GGTLC1Q9BX51 225 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 LIN7CQ9NUP9 197 aaKnown RBP9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 HSPB8Q9UJY1 196 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 F5H5K5 113 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 GCSAMLQ5JQS6 135 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 GDF5OSQ5U4N7 250 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 LINC00173Q6ZV60 143 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 NHLRC2Q8NBF2 726 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 GJC3Q8NFK1 279 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 CCL17Q92583 94 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 NAA38Q9BRA0 125 aaKnown RBP9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 SERTAD4Q9NUC0 356 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 SELENOKQ9Y6D0 94 aa9.14□□□□□ -0.95
TRAF3IP2-208ENST00000392556 TRBV6-6A0A0A6YYG2 114 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 SPRY3O43610 288 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 FSHBP01225 129 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 IGHV3-7P01780 117 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 SMIM13P0DJ93 91 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 RSPO1Q2MKA7 263 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 IBA57Q5T440 356 aaKnown RBP9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 ATP5L2Q7Z4Y8 100 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 C3orf56Q8N813 242 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 NPIPB11E5RHQ5 1161 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 TIMM8AO60220 97 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 FSTL3O95633 263 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 CT45A6P0DMU7 189 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 CT45A5P0DMU8 189 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 CT45A7P0DMV0 189 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 MGST1P10620 155 aaKnown RBP9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 MPV17P39210 176 aa9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 TNFAIP6P98066 277 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-208ENST00000392556 FXYD3Q14802 87 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms