RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 TRAV27A0A087WT01 109 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 PSMD12O00232 456 aaPredicted RBP-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 CFDP00746 253 aaPredicted RBP-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 EVI2AP22794 236 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 PSME3P61289 254 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 EIF5AP63241 154 aaKnown RBP-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 ANGPT1Q15389 498 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 C1orf134Q5TEV5 83 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 LRRN1Q6UXK5 716 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 ARPINQ7Z6K5 226 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 PIGXQ8TBF5 258 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 FAM172AQ8WUF8 416 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 SIKE1Q9BRV8 207 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 AGPAT3Q9NRZ7 376 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 WNK1Q9H4A3 2382 aa-1.42□□□□□ -2.64
TRAJ48-201ENST00000390489 COL24A1Q17RW2 1714 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 SPAG17Q6Q759 2223 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 SPTBN2O15020 2390 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 C1orf196B1AJZ1 125 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 M0R233 179 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 PIRO00625 290 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 CRYZL1O95825 349 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 APOEP02649 317 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 OR10J4P0C629 311 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 HIST1H1TP22492 207 aaPredicted RBP-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 SPOPLQ6IQ16 392 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 PDZD9Q8IXQ8 264 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 KRT222Q8N1A0 295 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 C5orf17Q8NAS9 161 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 MRPL27Q9P0M9 148 aaKnown RBP-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 FBXO5Q9UKT4 447 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 LSM5Q9Y4Y9 91 aaKnown RBP-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 VWFP04275 2813 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 FAT2Q9NYQ8 4349 aa-1.43□□□□□ -2.64
TRAJ48-201ENST00000390489 FLNBO75369 2602 aaKnown RBP-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 B4DSR2 109 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 SERPINE1P05121 402 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 S100A9P06702 114 aaKnown RBP-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 OCMP0CE72 109 aaPredicted RBP-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 RPL5P46777 297 aaKnown RBP-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 RPS20P60866 119 aaKnown RBP-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 MYL5Q02045 173 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 ZCCHC23Q6ZST2 131 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 OR51A2Q8NGJ7 313 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 NAT14Q8WUY8 206 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 SLC35B4Q969S0 331 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 YPEL2Q96QA6 119 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 CCDC90BQ9GZT6 254 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 TMEM126AQ9H061 195 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 TMEM133Q9H2Q1 129 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 OR51I1Q9H343 314 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 PLEKHJ1Q9NW61 149 aa-1.44□□□□□ -2.64
TRAJ48-201ENST00000390489 F5P12259 2224 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 A0A096LNT2 108 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 A0A096LPI6 279 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 CXCR6O00574 342 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 NDUFB3O43676 98 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 IGHV3-30P01768 117 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 IGHV3-30-5P0DP03 117 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 SRP14P37108 136 aaKnown RBP-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 MLLT11Q13015 90 aaPredicted RBP-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 ZNF56Q15929 161 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 C22orf39Q6P5X5 142 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 DNAJB3Q8WWF6 145 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 LIMD2Q9BT23 127 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 HECW1Q76N89 1606 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 ESPL1Q14674 2120 aa-1.45□□□□□ -2.64
TRAJ48-201ENST00000390489 ABCA1O95477 2261 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 RPS3P23396 243 aaKnown RBP eCLIP-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 RAB5CP51148 216 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 HIST2H3PS2Q5TEC6 136 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 CD200R1LQ6Q8B3 271 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 S100A7AQ86SG5 101 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 OR51D1Q8NGF3 324 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 DDI1Q8WTU0 396 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 RAB8BQ92930 207 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 MALSU1Q96EH3 234 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 LINC00208Q96KT6 92 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 PRR15LQ9BU68 103 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 HERC2O95714 4834 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 LAMA5O15230 3695 aa-1.46□□□□□ -2.64
TRAJ48-201ENST00000390489 LAMC3Q9Y6N6 1575 aa-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 DOCK4Q8N1I0 1966 aa-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 GOLGA8KD6RF30 607 aa-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 PRM1P04553 51 aa-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 MED21Q13503 144 aa-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 OGFRL1Q5TC84 451 aaPredicted RBP-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 POP5Q969H6 163 aaKnown RBP-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 C19orf60Q96EN9 201 aa-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 ARL5AQ9Y689 179 aa-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 ATG2AQ2TAZ0 1938 aa-1.47□□□□□ -2.64
TRAJ48-201ENST00000390489 RTL1A6NKG5 1358 aa-1.47□□□□□ -2.65
TRAJ48-201ENST00000390489 FABP12A6NFH5 140 aa-1.48□□□□□ -2.65
TRAJ48-201ENST00000390489 YKT6O15498 198 aa-1.48□□□□□ -2.65
TRAJ48-201ENST00000390489 IGLV1-51P01701 117 aa-1.48□□□□□ -2.65
TRAJ48-201ENST00000390489 RPS12P25398 132 aaKnown RBP-1.48□□□□□ -2.65
TRAJ48-201ENST00000390489 SPRR2BP35325 72 aa-1.48□□□□□ -2.65
TRAJ48-201ENST00000390489 RANP62826 216 aaKnown RBP-1.48□□□□□ -2.65
TRAJ48-201ENST00000390489 KRR1Q13601 381 aaKnown RBP-1.48□□□□□ -2.65
TRAJ48-201ENST00000390489 Q5XG85 94 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms