RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 GFI1BQ5VTD9 330 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 MDS2Q8NDY4 140 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 RNF126Q9BV68 326 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 C11orf68Q9H3H3 251 aaKnown RBP10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 A0A1B0GV72 72 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 TMEM95Q3KNT9 176 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 NIT1Q86X76 327 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 Q0VFX4 171 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 C11orf44Q8N8P7 122 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 NAPSAO96009 420 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 TPTE2P1Q5T6R2 138 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 MORN3Q6PF18 240 aaPredicted RBP10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 CA1P00915 261 aaPredicted RBP10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 ADMP35318 185 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 C1QL4Q86Z23 238 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 MGST2Q99735 147 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 RNF114Q9Y508 228 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 EXOC3-AS1Q8N2X6 119 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 FGFBP3Q8TAT2 258 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 MLNRO43193 412 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 TEX38Q6PEX7 206 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 SLC25A2Q9BXI2 301 aa10.12□□□□□ -0.79
KCNQ3-201ENST00000388996 S100A7L2Q5SY68 101 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 GSN-AS1Q9NRJ2 163 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 RNF5Q99942 180 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 CRIM1Q9NZV1 1036 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 CLDN16Q9Y5I7 305 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 TRGV1A0A0A0MS02 117 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 SLC25A15Q9Y619 301 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 GGTLC1Q9BX51 225 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 IGKV1-12A0A0C4DH73 117 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 GGTLC3B5MD39 225 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 IGKV1D-12P01611 117 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BKO60814 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BJP06899 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BOP23527 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BBP33778 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BDP58876 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BCP62807 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST2H2BEQ16778 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BHQ93079 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BNQ99877 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 HIST1H2BMQ99879 126 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 H0YJW9 148 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 ID3Q02535 119 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 ZNF319Q9P2F9 582 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 CD33P20138 364 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 GAS1P54826 345 aa10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 NHP2Q9NX24 153 aaKnown RBP10.11□□□□□ -0.79
KCNQ3-201ENST00000388996 CLPSP04118 112 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 SLC25A39Q9BZJ4 359 aaPredicted RBP10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 NEUROG3Q9Y4Z2 214 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 EPG5Q9HCE0 2579 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 RPL35AP18077 110 aaKnown RBP10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 PMS2P5A8MQ11 134 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 TMEM238C9JI98 176 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 ACTL10Q5JWF8 245 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 H3BUX3 64 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 C10orf55Q5SWW7 151 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 ADARB2-AS1A8MUL3 147 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 FAM223BA6NKX1 122 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 GZMBP10144 247 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 GNLYP22749 145 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 FAM223AQ8IWN6 122 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 KLHL30-AS1Q8NEE0 82 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 C5orf30Q96GV9 206 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 ATRAIDQ6UW56 229 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 GAFA1Q96PS6 74 aa10.1□□□□□ -0.79
KCNQ3-201ENST00000388996 A0A087WX48 190 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 LHFPL4Q7Z7J7 247 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 LINC00527Q9UJ94 153 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 IGHV3-73A0A0B4J1V6 119 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 IGKCP01834 107 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 LINC01356Q8N9X3 169 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 CD177Q8N6Q3 437 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 OCC1Q8TAD7 63 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 TRAV2A0A0B4J234 112 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 H0YIZ8 118 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 SRSF3P84103 164 aaKnown RBP10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 PIP4P2Q8N4L2 257 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 BRD3OSQ6XYD6 125 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 TRAV5A0A0B4J249 113 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 LINC00614P0C842 121 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 FOXL1Q12952 345 aa10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 PNRC2Q9NPJ4 139 aaKnown RBP10.09□□□□□ -0.79
KCNQ3-201ENST00000388996 A0A1B0GW64 132 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 A0A1B0GWJ7 208 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 WFDC12Q8WWY7 111 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 SCRT1Q9BWW7 348 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 LINC01549A6NIU2 74 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 PPIFP30405 207 aaKnown RBP10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 CITED2Q99967 270 aaPredicted RBP10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 PSG1P11464 419 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 LTBP2Q14767 1821 aa10.08□□□□□ -0.8
KCNQ3-201ENST00000388996 NPIPB5A8MRT5 1133 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms