RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 RIGQ13278 110 aa11.97□□□□□ -0.49
CTNS-202ENST00000381870 THAP8Q8NA92 274 aa11.97□□□□□ -0.49
CTNS-202ENST00000381870 STXBP6Q8NFX7 210 aa11.97□□□□□ -0.49
CTNS-202ENST00000381870 SERTM2A0A1B0GWG4 89 aa11.96□□□□□ -0.49
CTNS-202ENST00000381870 CGB1A6NKQ9 187 aa11.96□□□□□ -0.49
CTNS-202ENST00000381870 IGLV2-11P01706 119 aa11.96□□□□□ -0.49
CTNS-202ENST00000381870 FOXI2Q6ZQN5 318 aa11.96□□□□□ -0.49
CTNS-202ENST00000381870 GOLT1AQ6ZVE7 132 aa11.96□□□□□ -0.49
CTNS-202ENST00000381870 SPAG8Q99932 426 aaPredicted RBP11.96□□□□□ -0.49
CTNS-202ENST00000381870 SPATA25Q9BR10 227 aa11.96□□□□□ -0.49
CTNS-202ENST00000381870 TANC2Q9HCD6 1990 aa11.96□□□□□ -0.49
CTNS-202ENST00000381870 IGKV2D-26A0A0A0MRZ7 120 aa11.96□□□□□ -0.5
CTNS-202ENST00000381870 PHLDA1Q8WV24 401 aaPredicted RBP11.96□□□□□ -0.5
CTNS-202ENST00000381870 HARBI1Q96MB7 349 aa11.96□□□□□ -0.5
CTNS-202ENST00000381870 CXCL12P48061 93 aa11.95□□□□□ -0.5
CTNS-202ENST00000381870 EXOC3-AS1Q8N2X6 119 aa11.95□□□□□ -0.5
CTNS-202ENST00000381870 ARPC1AQ92747 370 aa11.95□□□□□ -0.5
CTNS-202ENST00000381870 CRYBA4P53673 196 aa11.95□□□□□ -0.5
CTNS-202ENST00000381870 IFI27L1Q96BM0 104 aa11.95□□□□□ -0.5
CTNS-202ENST00000381870 HEATR1Q9H583 2144 aaKnown RBP11.95□□□□□ -0.5
CTNS-202ENST00000381870 NHP2Q9NX24 153 aaKnown RBP11.95□□□□□ -0.5
CTNS-202ENST00000381870 NTN3O00634 580 aaPredicted RBP11.94□□□□□ -0.5
CTNS-202ENST00000381870 MEOX1P50221 254 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 ETDBQ3ZM63 59 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 ZCCHC24Q8N2G6 241 aaKnown RBP11.94□□□□□ -0.5
CTNS-202ENST00000381870 MTURNQ8N3F0 131 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 DSPP15924 2871 aaKnown RBP11.94□□□□□ -0.5
CTNS-202ENST00000381870 PRRC2CQ9Y520 2896 aaKnown RBP11.94□□□□□ -0.5
CTNS-202ENST00000381870 SVILO95425 2214 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 IGHV3-21A0A0B4J1V1 117 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 CECR9P0C854 216 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 ATP5G2Q06055 141 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 PEAR1Q5VY43 1037 aaPredicted RBP11.94□□□□□ -0.5
CTNS-202ENST00000381870 MOGAT3Q86VF5 341 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 MRPL20Q9BYC9 149 aaKnown RBP11.94□□□□□ -0.5
CTNS-202ENST00000381870 SPRR3Q9UBC9 169 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
CTNS-202ENST00000381870 A0A1W2PRD5 423 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 A0A1W2PRF3 423 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 A0A1W2PRM7 423 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 HBDP02042 147 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 INSL3P51460 131 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 CHAC1Q9BUX1 264 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 DSCAMO60469 2012 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 H3BMG7 143 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 NDUFS7O75251 213 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 IGKV3-15P01624 115 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 AMN1Q8IY45 258 aa11.93□□□□□ -0.5
CTNS-202ENST00000381870 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 TMEM213A2RRL7 107 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 PRR33A8MZF0 331 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 F8W1H4 67 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 C16orf97H3BN30 126 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 J3QR89 54 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 K7ESF4 209 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 PAX8Q06710 450 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 MSMPQ1L6U9 139 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 K7EQM0 130 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 AMTNQ6UX39 209 aa11.92□□□□□ -0.5
CTNS-202ENST00000381870 WI2-2373I1.2A0A1W2PRP0 233 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 SMKR1H3BMG3 65 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 SLC25A17O43808 307 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 TMEM105Q8N8V8 129 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 PLXNB1O43157 2135 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 E9PLD3 99 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 CRIP1P50238 77 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 HCP5Q6MZN7 132 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 C6orf15Q6UXA7 325 aaPredicted RBP11.91□□□□□ -0.5
CTNS-202ENST00000381870 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
CTNS-202ENST00000381870 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 PLSCR4Q9NRQ2 329 aa11.91□□□□□ -0.5
CTNS-202ENST00000381870 AHCTF1Q8WYP5 2266 aa11.9□□□□□ -0.5
CTNS-202ENST00000381870 IGLL5B9A064 214 aa11.9□□□□□ -0.5
CTNS-202ENST00000381870 SUB1P53999 127 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTNS-202ENST00000381870 TCTEX1D4Q5JR98 221 aa11.9□□□□□ -0.5
CTNS-202ENST00000381870 DEFB108BQ8NET1 73 aa11.9□□□□□ -0.5
CTNS-202ENST00000381870 U3KQK5 164 aa11.9□□□□□ -0.5
CTNS-202ENST00000381870 INS-IGF2F8WCM5 200 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 LPAL2Q16609 132 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 ZNF493Q6ZR52 646 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 ORMDL3Q8N138 153 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
CTNS-202ENST00000381870 HIGD1BQ9P298 99 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 TRBV25-1A0A075B6N4 114 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 TMSB15BA0A087X1C1 80 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 A0A1B0GW15 77 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 APELAP0DMC3 54 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 MBNL2Q5VZF2 373 aaKnown RBP11.89□□□□□ -0.51
CTNS-202ENST00000381870 FAM104BQ5XKR9 115 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 CNEP1R1Q8N9A8 125 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 RAB9BQ9NP90 201 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 MED13Q9UHV7 2174 aa11.89□□□□□ -0.51
CTNS-202ENST00000381870 CT45A10P0DMU9 189 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 HOXB4P17483 251 aaPredicted RBP11.88□□□□□ -0.51
CTNS-202ENST00000381870 MRPL51Q4U2R6 128 aaKnown RBP11.88□□□□□ -0.51
CTNS-202ENST00000381870 LYZL1Q6UWQ5 148 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 Q6ZT83 130 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 CEND1Q8N111 149 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms