RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 NDUFB8O95169 186 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 IGHV2-5P01817 119 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 FBXL19-AS1Q494R0 122 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 G3V318 75 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 Q1RN00 199 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 FAM110DQ8TAY7 271 aaPredicted RBP9.83□□□□□ -0.84
GABPB1-203ENST00000380877 TRAV8-1A0A0A6YYK1 113 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BKO60814 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 PRB1P04280 392 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BJP06899 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 PAX1P15863 534 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HOXA5P20719 270 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BOP23527 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BBP33778 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 NMUP48645 174 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BDP58876 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BCP62807 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST2H2BEQ16778 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 FBLN7Q53RD9 439 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-203ENST00000380877 TMEM190Q8WZ59 177 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BHQ93079 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BNQ99877 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 HIST1H2BMQ99879 126 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 FAM223BA6NKX1 122 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 M0R3E3 92 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 CD33P20138 364 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 C1orf122Q6ZSJ8 110 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 FAM223AQ8IWN6 122 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 J3QKU1 62 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 REC114Q7Z4M0 266 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 ORMDL3Q8N138 153 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
GABPB1-203ENST00000380877 TRAV21A0A0B4J279 112 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 OVOL1O14753 267 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 DUX3Q96PT4 197 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 MYO9AB2RTY4 2548 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 TNCP24821 2201 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 APOHP02749 345 aaPredicted RBP9.81□□□□□ -0.84
GABPB1-203ENST00000380877 PPIFP30405 207 aaKnown RBP9.81□□□□□ -0.84
GABPB1-203ENST00000380877 FOXL1Q12952 345 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 ZNF726P1Q15940 193 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 CBY3A6NI87 242 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 DUSP14O95147 198 aaKnown RBP9.81□□□□□ -0.84
GABPB1-203ENST00000380877 ADMP35318 185 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 ZNF502Q8TBZ5 544 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 Q96MF0 132 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 SERF1AO75920 110 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 SPATA45Q537H7 98 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 LYPD1Q8N2G4 141 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 LY96Q9Y6Y9 160 aa9.81□□□□□ -0.84
GABPB1-203ENST00000380877 NUP210LQ5VU65 1888 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 KCNS1Q96KK3 526 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 HIVEP2P31629 2446 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 YPEL3P61236 119 aaPredicted RBP9.8□□□□□ -0.84
GABPB1-203ENST00000380877 ATOH7Q8N100 152 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 FAM19A2Q8N3H0 131 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 LINC00479Q96M42 142 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 CD7P09564 240 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 GZMBP10144 247 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 IGFL4Q6B9Z1 124 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 GNB1LQ9BYB4 327 aa9.8□□□□□ -0.84
GABPB1-203ENST00000380877 OVOL3O00110 214 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 ZNF688P0C7X2 276 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 SMAGPQ0VAQ4 97 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 Q8TAT8 98 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 LINC01587Q99440 93 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 BEX4Q9NWD9 120 aaPredicted RBP9.79□□□□□ -0.84
GABPB1-203ENST00000380877 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.84
GABPB1-203ENST00000380877 TMEM70Q9BUB7 260 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 OR4C46A6NHA9 309 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 LCN12Q6JVE5 192 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 PPP1R17O96001 155 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 CR1LQ2VPA4 569 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 CRIP3Q6Q6R5 217 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 C22orf34Q6ZV56 151 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 C18orf15Q96N68 181 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 RHPN1-AS1Q9BWJ2 59 aa9.79□□□□□ -0.84
GABPB1-203ENST00000380877 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
GABPB1-203ENST00000380877 OR11H6Q8NGC7 330 aa9.78□□□□□ -0.84
GABPB1-203ENST00000380877 IGHV4-61A0A0C4DH41 118 aa9.78□□□□□ -0.84
GABPB1-203ENST00000380877 ZNF138P52744 262 aa9.78□□□□□ -0.84
GABPB1-203ENST00000380877 WFDC12Q8WWY7 111 aa9.78□□□□□ -0.84
GABPB1-203ENST00000380877 LOC105371267A0A1B0GV96 52 aa9.78□□□□□ -0.84
GABPB1-203ENST00000380877 H7C1H1 209 aa9.78□□□□□ -0.84
GABPB1-203ENST00000380877 SCGB1C2P0DMR2 95 aa9.78□□□□□ -0.84
GABPB1-203ENST00000380877 PDE6HQ13956 83 aa9.78□□□□□ -0.84
GABPB1-203ENST00000380877 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.84
GABPB1-203ENST00000380877 FNDC4Q9H6D8 234 aaPredicted RBP9.77□□□□□ -0.84
GABPB1-203ENST00000380877 IGLC7A0M8Q6 106 aa9.77□□□□□ -0.85
GABPB1-203ENST00000380877 IGHV4-39P01824 125 aa9.77□□□□□ -0.85
GABPB1-203ENST00000380877 LEPP41159 167 aa9.77□□□□□ -0.85
GABPB1-203ENST00000380877 DAZ1Q9NQZ3 744 aaKnown RBP9.77□□□□□ -0.85
GABPB1-203ENST00000380877 HOXB4P17483 251 aaPredicted RBP9.77□□□□□ -0.85
GABPB1-203ENST00000380877 PSG3Q16557 428 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms