RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 TRAV8-1A0A0A6YYK1 113 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 PFN1P07737 140 aaKnown RBP7.86□□□□□ -1.15
SNX1-202ENST00000380285 PRSS22Q9GZN4 317 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 CST9LQ9H4G1 147 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 TRAV12-3A0A0B4J271 114 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 IGHV1-18A0A0C4DH31 117 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 hDV102S1A0JD36 115 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 TMEM155Q4W5P6 130 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 FAM231DQ6ZW35 169 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 ZNF329Q86UD4 541 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 LEPROTO15243 131 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 TNFRSF6BO95407 300 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 Q6P435 159 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 KLF12Q9Y4X4 402 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 C9orf118A6NHY6 69 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 M0R1W7 72 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 PLXNA2O75051 1894 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 SH2D1AO60880 128 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 USMG5Q96IX5 58 aa7.86□□□□□ -1.15
SNX1-202ENST00000380285 ADAMTSL5Q6ZMM2 481 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 PLSCR4Q9NRQ2 329 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 IGHV2-26A0A0B4J1V2 119 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 NTF4P34130 210 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 YPEL3P61236 119 aaPredicted RBP7.85□□□□□ -1.15
SNX1-202ENST00000380285 TMEM141Q96I45 108 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 H0YJW9 148 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 MESP1Q9BRJ9 268 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 IGHV1-24A0A0C4DH33 117 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 SIVA1O15304 175 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 TAL2Q16559 108 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 FAM201AQ5SY85 155 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 MGAMO43451 1857 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 WNT2P09544 360 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 IGHV1-8P0DP01 117 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 ZNF415Q09FC8 603 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 RSPO4Q2I0M5 234 aaPredicted RBP7.85□□□□□ -1.15
SNX1-202ENST00000380285 COLCA1Q6ZS62 124 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 GTSF1LQ9H1H1 148 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 FAM223BA6NKX1 122 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 E9PQ18 207 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 ZFP36L1Q07352 338 aaKnown RBP7.85□□□□□ -1.15
SNX1-202ENST00000380285 CSRP2Q16527 193 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 Q86TA4 180 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 FAM223AQ8IWN6 122 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 S4R3C0 116 aa7.85□□□□□ -1.15
SNX1-202ENST00000380285 TMEM8BA6NDV4 472 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 TIMM23O14925 209 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 IGHV1-46P01743 117 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 PPDPFLQ8WWR9 84 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 PRADC1Q9BSG0 188 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 NDUFB8O95169 186 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 VDAC2P45880 294 aaPredicted RBP7.84□□□□□ -1.15
SNX1-202ENST00000380285 PLXND1Q9Y4D7 1925 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 LCN12Q6JVE5 192 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 EXOC3-AS1Q8N2X6 119 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 OR11H6Q8NGC7 330 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 TMEM158Q8WZ71 300 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 LINC01560Q8TB33 94 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 SCRT1Q9BWW7 348 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 LIME1Q9H400 295 aa7.84□□□□□ -1.15
SNX1-202ENST00000380285 IGHV1-3A0A0C4DH29 117 aa7.84□□□□□ -1.16
SNX1-202ENST00000380285 PRSS46E5RG02 174 aa7.84□□□□□ -1.16
SNX1-202ENST00000380285 DSCR9P59020 149 aa7.84□□□□□ -1.16
SNX1-202ENST00000380285 C17orf82Q86X59 251 aaPredicted RBP7.84□□□□□ -1.16
SNX1-202ENST00000380285 C18orf32Q8TCD1 76 aa7.84□□□□□ -1.16
SNX1-202ENST00000380285 DYSFO75923 2080 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 TRAV41A0A0B4J266 112 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 SFTA2Q6UW10 78 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 SRSF2Q01130 221 aaKnown RBP7.83□□□□□ -1.16
SNX1-202ENST00000380285 C15orf32Q32M92 178 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 SNHG12Q9BXW3 62 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 ANAPC1Q9H1A4 1944 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 IGKV2-40A0A087WW87 121 aaPredicted RBP7.83□□□□□ -1.16
SNX1-202ENST00000380285 IGKV2D-40P01614 121 aaPredicted RBP7.83□□□□□ -1.16
SNX1-202ENST00000380285 THBDP07204 575 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 RPL36AP83881 106 aaKnown RBP7.83□□□□□ -1.16
SNX1-202ENST00000380285 ZCCHC24Q8N2G6 241 aaKnown RBP7.83□□□□□ -1.16
SNX1-202ENST00000380285 RPL36ALQ969Q0 106 aaKnown RBP7.83□□□□□ -1.16
SNX1-202ENST00000380285 HAX1O00165 279 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 RNASE2P10153 161 aaKnown RBP7.83□□□□□ -1.16
SNX1-202ENST00000380285 LINC00158P58513 81 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 LGALS9BQ3B8N2 356 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 LY6G5BQ8NDX9 201 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 C7orf69Q9H7B7 122 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 EREGO14944 169 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 IGLC2P0DOY2 106 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 IGLC3P0DOY3 106 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 COX8AP10176 69 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 HGFACQ04756 655 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 C3orf36Q3SXR2 165 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 TIMM21Q9BVV7 248 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 FRMPD3Q5JV73 1810 aa7.83□□□□□ -1.16
SNX1-202ENST00000380285 E9PLN8 166 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 TMEM200BQ69YZ2 307 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 SHANK2-AS3Q9BTD1 123 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 TMEM14BQ9NUH8 114 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 RLFQ13129 1914 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 SMIM27A0A1W2PRY6 76 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms