RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
UPK1A-202ENST00000379013 SHANK2-AS3Q9BTD1 123 aa10.54□□□□□ -0.72
UPK1A-202ENST00000379013 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
UPK1A-202ENST00000379013 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
UPK1A-202ENST00000379013 IGHV3OR16-8A0A075B7F1 116 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 ZNF98A6NK75 572 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 BUB3O43684 328 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 CDC34P49427 236 aaPredicted RBP10.53□□□□□ -0.72
UPK1A-202ENST00000379013 RAB2AP61019 212 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 RNF141Q8WVD5 230 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 RHPN1-AS1Q9BWJ2 59 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 VSIRQ9H7M9 311 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 NBEAL2Q6ZNJ1 2754 aa10.53□□□□□ -0.72
UPK1A-202ENST00000379013 HUWE1Q7Z6Z7 4374 aaKnown RBP10.52□□□□□ -0.72
UPK1A-202ENST00000379013 TRAV25A0A0B4J276 109 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 CTXND1A0A1B0GTU2 59 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 CHEK1O14757 476 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 ZNF207O43670 478 aaKnown RBP10.52□□□□□ -0.73
UPK1A-202ENST00000379013 LCN12Q6JVE5 192 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 PQLC2Q6ZP29 291 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 RBPMS2Q6ZRY4 209 aaKnown RBP10.52□□□□□ -0.73
UPK1A-202ENST00000379013 TMEM37Q8WXS4 190 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 UHRF2Q96PU4 802 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 U3KQE9 123 aa10.52□□□□□ -0.73
UPK1A-202ENST00000379013 CSN3P07498 182 aa10.51□□□□□ -0.73
UPK1A-202ENST00000379013 ATF4P18848 351 aaPredicted RBP10.51□□□□□ -0.73
UPK1A-202ENST00000379013 SULT1A2P50226 295 aa10.51□□□□□ -0.73
UPK1A-202ENST00000379013 GUK1Q16774 197 aa10.51□□□□□ -0.73
UPK1A-202ENST00000379013 FAM122CQ6P4D5 195 aa10.51□□□□□ -0.73
UPK1A-202ENST00000379013 C16orf54Q6UWD8 224 aa10.51□□□□□ -0.73
UPK1A-202ENST00000379013 PATE2Q6UY27 113 aa10.51□□□□□ -0.73
UPK1A-202ENST00000379013 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
UPK1A-202ENST00000379013 TENM3Q9P273 2699 aa10.51□□□□□ -0.73
UPK1A-202ENST00000379013 KMT2CQ8NEZ4 4911 aaKnown RBP10.5□□□□□ -0.73
UPK1A-202ENST00000379013 K7EIL1 84 aa10.5□□□□□ -0.73
UPK1A-202ENST00000379013 CXorf1O96002 111 aa10.5□□□□□ -0.73
UPK1A-202ENST00000379013 HBE1P02100 147 aa10.5□□□□□ -0.73
UPK1A-202ENST00000379013 RPL11P62913 178 aaKnown RBP10.5□□□□□ -0.73
UPK1A-202ENST00000379013 TEX261Q6UWH6 196 aa10.5□□□□□ -0.73
UPK1A-202ENST00000379013 ZNF414Q96IQ9 312 aa10.5□□□□□ -0.73
UPK1A-202ENST00000379013 RPRMQ9NS64 109 aa10.5□□□□□ -0.73
UPK1A-202ENST00000379013 TMEM14CQ9P0S9 112 aa10.5□□□□□ -0.73
UPK1A-202ENST00000379013 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
UPK1A-202ENST00000379013 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 OR7C2O60412 319 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 BLOC1S1P78537 153 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 GCSAMLQ5JQS6 135 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 ALKAL2Q6UX46 152 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
UPK1A-202ENST00000379013 FAM213BQ8TBF2 198 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 SCRT1Q9BWW7 348 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 SEPSECSQ9HD40 501 aaKnown RBP10.49□□□□□ -0.73
UPK1A-202ENST00000379013 UBQLN2Q9UHD9 624 aa10.49□□□□□ -0.73
UPK1A-202ENST00000379013 IGHV3-49A0A0A0MS15 119 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 IGLV1-51P01701 117 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 H2AFB1P0C5Y9 115 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 PPT1P50897 306 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 PDE6HQ13956 83 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 LCN15Q6UWW0 184 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 IL34Q6ZMJ4 242 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 ZNF767PQ75MW2 155 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 MRAPQ8TCY5 172 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 RAB24Q969Q5 203 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 SAT2Q96F10 170 aaPredicted RBP10.48□□□□□ -0.73
UPK1A-202ENST00000379013 SPAG8Q99932 426 aaPredicted RBP10.48□□□□□ -0.73
UPK1A-202ENST00000379013 PAXXQ9BUH6 204 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 TMEM167BQ9NRX6 74 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 CLEC5AQ9NY25 188 aa10.48□□□□□ -0.73
UPK1A-202ENST00000379013 IGHV3OR16-13A0A075B7E8 117 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 A0A087X0K7 114 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 IGHV3-74A0A0B4J1X5 117 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 IGHV3-66A0A0C4DH42 116 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 MAP1LC3B2A6NCE7 125 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 OR4C46A6NHA9 309 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 ZNF785A8K8V0 405 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 ZNF705EA8MWA4 302 aaPredicted RBP10.47□□□□□ -0.73
UPK1A-202ENST00000379013 DNASE2O00115 360 aaPredicted RBP10.47□□□□□ -0.73
UPK1A-202ENST00000379013 TSPAN4O14817 238 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 STAG3L2P0CL84 134 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 STAG3L3P0CL85 134 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 CMC4P56277 68 aaPredicted RBP10.47□□□□□ -0.73
UPK1A-202ENST00000379013 RAB14P61106 215 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
UPK1A-202ENST00000379013 DEFB114Q30KQ6 69 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 MIR17HGQ75NE6 70 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 SLC50A1Q9BRV3 221 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 MAP1LC3BQ9GZQ8 125 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 OR51M1Q9H341 326 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 HRH4Q9H3N8 390 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 NRN1Q9NPD7 142 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 MLXQ9UH92 298 aa10.47□□□□□ -0.73
UPK1A-202ENST00000379013 ZNF253O75346 499 aa10.46□□□□□ -0.73
UPK1A-202ENST00000379013 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.73
UPK1A-202ENST00000379013 HIST1H1EP10412 219 aaKnown RBP10.46□□□□□ -0.73
UPK1A-202ENST00000379013 ID1P41134 155 aa10.46□□□□□ -0.73
UPK1A-202ENST00000379013 EGFEM1PQ0D2K5 195 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms