RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 FOXF2Q12947 444 aa11.96□□□□□ -0.49
PRDM16-203ENST00000378391 TMEM133Q9H2Q1 129 aa11.96□□□□□ -0.49
PRDM16-203ENST00000378391 A0A0U1RQV1 116 aa11.96□□□□□ -0.5
PRDM16-203ENST00000378391 M0R2P5 195 aa11.96□□□□□ -0.5
PRDM16-203ENST00000378391 ATP5J2P56134 94 aa11.96□□□□□ -0.5
PRDM16-203ENST00000378391 KNCNA6PVL3 124 aa11.96□□□□□ -0.5
PRDM16-203ENST00000378391 C9orf172C9J069 976 aa11.96□□□□□ -0.5
PRDM16-203ENST00000378391 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.5
PRDM16-203ENST00000378391 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 HGFACQ04756 655 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
PRDM16-203ENST00000378391 CYYR1Q96J86 154 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 LY96Q9Y6Y9 160 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 INTS1Q8N201 2190 aaKnown RBP11.95□□□□□ -0.5
PRDM16-203ENST00000378391 C9JAW5 83 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 IGKV1-5P01602 117 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 H3BRM9 83 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 PLNP26678 52 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 F8W1H4 67 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 SRSF1Q07955 248 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRDM16-203ENST00000378391 LYPD6Q86Y78 171 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 ABCA1O95477 2261 aa11.95□□□□□ -0.5
PRDM16-203ENST00000378391 TRBV6-6A0A0A6YYG2 114 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 WNT2P09544 360 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 FAM90A2PQ658T7 463 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 TMEM42Q69YG0 159 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 CLEC19AQ6UXS0 136 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 C8orf46Q8TAG6 207 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 MED12Q93074 2177 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 GZMBP10144 247 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 CEACAM8P31997 349 aaPredicted RBP11.94□□□□□ -0.5
PRDM16-203ENST00000378391 SLC25A48Q6ZT89 311 aaKnown RBP11.94□□□□□ -0.5
PRDM16-203ENST00000378391 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 DOPEY2Q9Y3R5 2298 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 CNTFRP26992 372 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 CFHR1Q03591 330 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 RPUSD1Q9UJJ7 312 aaKnown RBP11.94□□□□□ -0.5
PRDM16-203ENST00000378391 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
PRDM16-203ENST00000378391 SRRM5B3KS81 715 aa11.94□□□□□ -0.5
PRDM16-203ENST00000378391 CENPVQ7Z7K6 275 aaPredicted RBP11.94□□□□□ -0.5
PRDM16-203ENST00000378391 ZFP36L1Q07352 338 aaKnown RBP11.93□□□□□ -0.5
PRDM16-203ENST00000378391 ACTL10Q5JWF8 245 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 H3BMM0 161 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 Q6ZS49 121 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 UBE2WQ96B02 151 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 IGHV3OR16-8A0A075B7F1 116 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 F2Z2F3 143 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 ORMDL2Q53FV1 153 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 GGNQ86UU5 652 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.93□□□□□ -0.5
PRDM16-203ENST00000378391 COX6B1P14854 86 aa11.93□□□□□ -0.5
PRDM16-203ENST00000378391 C17orf82Q86X59 251 aaPredicted RBP11.92□□□□□ -0.5
PRDM16-203ENST00000378391 SMPXQ9UHP9 88 aa11.92□□□□□ -0.5
PRDM16-203ENST00000378391 TMEM256Q8N2U0 113 aa11.92□□□□□ -0.5
PRDM16-203ENST00000378391 LINC01549A6NIU2 74 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 PSPNO60542 156 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 TICRRQ7Z2Z1 1910 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 IGKV3OR2-268A0A0C4DH90 116 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 TFF1P04155 84 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 Q71RC1 249 aaPredicted RBP11.91□□□□□ -0.5
PRDM16-203ENST00000378391 IGHV3OR16-10A0A075B7F0 116 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 IGHV1-18A0A0C4DH31 117 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 NPC2P61916 151 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 BPTFQ12830 3046 aa11.91□□□□□ -0.5
PRDM16-203ENST00000378391 IGKCP01834 107 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 CD33P20138 364 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 FOXG1P55316 489 aaPredicted RBP11.9□□□□□ -0.5
PRDM16-203ENST00000378391 TCTEX1D4Q5JR98 221 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 SPTBN2O15020 2390 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 PINLYPA6NC86 204 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.5
PRDM16-203ENST00000378391 K7EP34 96 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 ZNF688P0C7X2 276 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 ROS1P08922 2347 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 TOMM40O96008 361 aa11.9□□□□□ -0.5
PRDM16-203ENST00000378391 GUSBP1Q15486 140 aa11.89□□□□□ -0.51
PRDM16-203ENST00000378391 OXLD1Q5BKU9 147 aa11.89□□□□□ -0.51
PRDM16-203ENST00000378391 SPATA31B1PQ5VZV4 182 aa11.89□□□□□ -0.51
PRDM16-203ENST00000378391 IFI27P40305 119 aaPredicted RBP11.89□□□□□ -0.51
PRDM16-203ENST00000378391 RNF182Q8N6D2 247 aa11.89□□□□□ -0.51
PRDM16-203ENST00000378391 CHAC1Q9BUX1 264 aa11.89□□□□□ -0.51
PRDM16-203ENST00000378391 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
PRDM16-203ENST00000378391 A0A0G2JRQ6 117 aa11.89□□□□□ -0.51
PRDM16-203ENST00000378391 C9orf118A6NHY6 69 aa11.88□□□□□ -0.51
PRDM16-203ENST00000378391 FNDC10F2Z333 226 aa11.88□□□□□ -0.51
PRDM16-203ENST00000378391 NTN3O00634 580 aaPredicted RBP11.88□□□□□ -0.51
PRDM16-203ENST00000378391 DUX3Q96PT4 197 aa11.88□□□□□ -0.51
PRDM16-203ENST00000378391 SPANXB1Q9NS25 103 aaPredicted RBP11.88□□□□□ -0.51
PRDM16-203ENST00000378391 DIDO1Q9BTC0 2240 aaKnown RBP11.88□□□□□ -0.51
PRDM16-203ENST00000378391 WNK2Q9Y3S1 2297 aa11.88□□□□□ -0.51
PRDM16-203ENST00000378391 IGHV1-46P01743 117 aa11.88□□□□□ -0.51
PRDM16-203ENST00000378391 C3orf79P0CE67 100 aa11.88□□□□□ -0.51
PRDM16-203ENST00000378391 C20orf144Q9BQM9 153 aa11.88□□□□□ -0.51
PRDM16-203ENST00000378391 SPRR3Q9UBC9 169 aa11.88□□□□□ -0.51
PRDM16-203ENST00000378391 SPTSSBQ8NFR3 76 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 INAFM2P0DMQ5 153 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 RETNQ9HD89 108 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms